Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01787 ATGCCAATCAAAATGCCTCTTACTCTAAGGAACAAGCTCAAGACTCTTTGTTCTTCTGTTCATGCCTGGTCTTATGCTATTTTCTGGCGTTTTCATCCACGCAATTCCTTGTTGTTGACTGTTGAAGAAGCGTACTATGAAGAGCATCTGGGAGAAGAGATTGCCAACATGCATCCACAGGTCCACTTGCTGGGTGAAGGAATTGTAGGTGAAGCTGCTTTCACGGGCAAACACAGTTGGGTGCACTCAGATGGTCAAACTCATTATTGGAATCTGTCTGGGCAAGATATTTGTGAGGATGATTCTTGTTTGCATCAACAGTTTTGCTCTGGAATAAAGACTATTGTGGTCATACCTGTCAAAGCAATAGGAGTGATACAGTTTGGATCCAGAAATAAGATTTTGGAGAGAGTGGAATTTTTGGAGCAAACACAAAGCATGCTCACAGAAATAGATGATGATGATAAGGGTATCTTTGACATGTCAGAAAATGCAGTTTTACCGCTGCTCTACCAAAATAATGATTTAAATGGGATGTTGGCTTCCGTTTCTTCTGCTAGTCCCAACGATCCCTTCCCTTCTCATTATAAAAACTATGAAGATGCAGTGGCTTCATTTCAAGGAGATTCTTCGTATCTTGGTGACCAATTGAAAGGTACCATGGAAGCACAAGTCGTATTGTCAGAAAGGATAAGTACTGATGTGCTTTTGAAGCCTAACTCTTCTACAGACAACTTAATTTCCAAAACCCCTTATCTTGGTGTATGTGATGGTGAATTATCTTCTTTTGATTTGTTGGAGCAACAATTGGTTTCCAGTGTAAGGGCGCAAGATGTTGCAGATGCGTGTTTTATGAATGAAAATGCATTTGCTACCTGCAAACTTCCAGTCCAGGATTCGGCATTGGTTCCATTGTGCAGTACGGACGGAGGGTCATTTCAAGGAAAATTACAAAATTCACTGGATAACCAATATTCAAATCAGTCTAGTGTTGTGACAGACGTTGAATTTTCCTCCAGTTTACATGCATTGCATGGACACTCTGAGAACATAGAGCCAGTTGACATGTCAGAAGAAATTTTGAAGTTCAGCTCCATGGATGATCTTTGCCACTGGTTTGGTCCTTCTTCAGAGGATAGCATCTGCAAAGCAGTAATTACATTGGATAACACCTTTTCTGAATCAACAGAATTTAATCCCACTTCCTTTGATCTGGTCGGAAGTAGTTCTTTAAATGATGTTTTATTGACAGGCCTAGCTGTGTATAATTCAAACTCAGATGGGAATGAAACATCTGTGGTTATGCATAACGCTGAAAAAGGTCCCTTGGATGTCATGGAAACTGATTTTAGCTATGACCAAGCCGATGAATGGTGGAGGAATACGCTTACACCAGTGGTGAGTGGTGTTACTGATACTGGCTTTTCTGAATGCATATCACAGTTGAATTCTGATACTCTGCCAGGCACCCGGAAGAGATTATTCTCCCAGTTAGGAATTGAAGAGCTTCTGAGGAGTGGAGCAAACTACAATCCCATCAATAGTTCGGAATTTGAGTGTGGGTTGTCATCCAATAAGAGGCAGACAGTAGAATCTTCATCTGTGAATGGAAGTACCATACATTTCACCAACCTTGATAGATCTGGGACGAGATCAGACTTGATGCAACCTCTTTGTGACTTAGGCAGCACAAACAATCTTCCAAGCAAGAAAGATACGTTCTCAAAATTACAAGCAGCCACTTTGGTTGATGATAGCCATAGCATTAATGTTGGAAAGGCTGTTCCACAACACCCTCAAAAGCCAGAGGAACAAGCAAAGCCCACCAATAAGAGGGCTAGGCCAGGGGAGAGTACTCGACCACGGCCAAAAGATCGTCAGCAAATCCAAGACTGTATTAAAGAGTTGAGAGGAATCATCCCCAATGGTGGAAAGTGTAGCATTGATTCTTTGTTAGACCGCACCATCAGATACATGCTTTTCTTACAAAGTGTCCTCAAGTATACAGACAAGCTACGAGAACCAAGTGAGCCGAAGCTTATTGAACAGGAAAATGAAGTGGTTCTAAAAGACAGTGGTGTGGCTGACAGCAAAAACTGTGGCATTACATGGGCATATGAAGTGGGGCACGAAACAATGCTATGCCCCATTATAGTTGAGGACATGAGTCCACCAGGCCAAATGCTTATTGAGATGCTTTGTGAGGTGCAGGGTATATTCCTTGAGATAATTGATATAATTCGGGGTTTTGGACTGAATATCTTGAAAGCCAAGATGGAAAGAAAGAAGAACAAACTATGGGCACGCTTTATTGTTGAGGCAAACAGACACGTGACAAGGATTGACGTGTTTTGGTCCCTTGTCCATCTTCTACAACAAACAAACACCTCTGGCATTGATTCTTCTAATAAGCATTGGGATGCTCTTCATGCCAATAGCCTCAGGTCCTAG 2451 0.4182 MPIKMPLTLRNKLKTLCSSVHAWSYAIFWRFHPRNSLLLTVEEAYYEEHLGEEIANMHPQVHLLGEGIVGEAAFTGKHSWVHSDGQTHYWNLSGQDICEDDSCLHQQFCSGIKTIVVIPVKAIGVIQFGSRNKILERVEFLEQTQSMLTEIDDDDKGIFDMSENAVLPLLYQNNDLNGMLASVSSASPNDPFPSHYKNYEDAVASFQGDSSYLGDQLKGTMEAQVVLSERISTDVLLKPNSSTDNLISKTPYLGVCDGELSSFDLLEQQLVSSVRAQDVADACFMNENAFATCKLPVQDSALVPLCSTDGGSFQGKLQNSLDNQYSNQSSVVTDVEFSSSLHALHGHSENIEPVDMSEEILKFSSMDDLCHWFGPSSEDSICKAVITLDNTFSESTEFNPTSFDLVGSSSLNDVLLTGLAVYNSNSDGNETSVVMHNAEKGPLDVMETDFSYDQADEWWRNTLTPVVSGVTDTGFSECISQLNSDTLPGTRKRLFSQLGIEELLRSGANYNPINSSEFECGLSSNKRQTVESSSVNGSTIHFTNLDRSGTRSDLMQPLCDLGSTNNLPSKKDTFSKLQAATLVDDSHSINVGKAVPQHPQKPEEQAKPTNKRARPGESTRPRPKDRQQIQDCIKELRGIIPNGGKCSIDSLLDRTIRYMLFLQSVLKYTDKLREPSEPKLIEQENEVVLKDSGVADSKNCGITWAYEVGHETMLCPIIVEDMSPPGQMLIEMLCEVQGIFLEIIDIIRGFGLNILKAKMERKKNKLWARFIVEANRHVTRIDVFWSLVHLLQQTNTSGIDSSNKHWDALHANSLRS* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01787 816 MobiDBLite consensus disorder prediction 604 628 - -
Phac7g01787 816 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 613 662 IPR011598 GO:0046983
Phac7g01787 816 MobiDBLite consensus disorder prediction 588 628 - -
Phac7g01787 816 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 626 669 IPR036638 GO:0046983
Phac7g01787 816 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 54 147 IPR025610 -
Phac7g01787 816 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 48 IPR025610 -
Phac7g01787 816 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 5 804 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01787 Phac-Chr7 15153778 15159054 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01787 578 801 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 50.885 6.60e-64 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01787 - - vun:114190585 1387.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g01787 7 15153778 15159054 Phac7g01787 7 15153778 15159054 ECH
Phac1g02284 1 32554652 32562818 Phac7g01787 7 15153778 15159054 PCT