Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01772 ATGGCAACAACCAGAAGATATGAGTTTGGAATGAACGAGGCTAGCCATCCAGACTCGATGAGAGCCACCATGGCTGAATTCTTCTCCACTTGCATCTTTGTCTTTGTTGGAGAAGGCTCAGTCCTTGCTTTGAATCATATTTACAAGGAACCGGGGTCATCAGCAGCTGAGCTAGTGGTAGTTGCAGTGGCTCATGCCTTTGCTCTATTTGCTGCTATTTCTATCAGTGCTCATGTTTCTGGTGGACACGTGAACCCTGCTGTCACTTTTGGTGCTCTTCTTGGTGGAAGGATCTCTGTCCTTAAAGCCCTCTACTATTGGGTTGCTCAAATCCTTGGTTCTATTGTTGCTGCTCTCTTGTTGAGGCTTGTCACTAACAACATGAGACCAGAGGGGTTCGGTTTATCAAGTGGGGTTGGAGCTGTTCATGGTCTTATACTTGAAATAAGTCTCACATTTGGTCTGATGTACACTGTCCATGCCACTGCTATTGATCCTAAAAGGGGTGCAATTAGCACAATCGCACCCTTAGCCATTGCACTGGTGGTAGGGGCAAACATCCTGGCTGGTGGGCCTTTTGATGGAGCATGCATGAACCCTGCTCGGGCTTTTGGGCCTGCATTGGTGGGCTGGAGGTGGCAGTACCACTGGATCTTCTGGGTGGGCCCATTACTTGGGGCAGCCTTAGCAGCAGTCCTGTATGAATTCGTTATGGTCCCAATTGAGCCTCCTCATCACCAACCTTTGCCTGCTGAAGATTACTAG 765 0.4876 MATTRRYEFGMNEASHPDSMRATMAEFFSTCIFVFVGEGSVLALNHIYKEPGSSAAELVVVAVAHAFALFAAISISAHVSGGHVNPAVTFGALLGGRISVLKALYYWVAQILGSIVAALLLRLVTNNMRPEGFGLSSGVGAVHGLILEISLTFGLMYTVHATAIDPKRGAISTIAPLAIALVVGANILAGGPFDGACMNPARAFGPALVGWRWQYHWIFWVGPLLGAALAAVLYEFVMVPIEPPHHQPLPAEDY* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01772 254 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Phac7g01772 254 NCBIfam MIP family channel protein 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01772 254 Gene3D Glycerol uptake facilitator protein. 8 242 IPR023271 -
Phac7g01772 254 SUPERFAMILY Aquaporin-like 13 245 IPR023271 -
Phac7g01772 254 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01772 254 PANTHER AQUAPORIN-8 11 242 IPR034294 -
Phac7g01772 254 FunFam Probable aquaporin TIP1-1 5 253 - -
Phac7g01772 254 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01772 254 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01772 254 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01772 254 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01772 254 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01772 254 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01772 254 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01772 Phac-Chr7 15030914 15032992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01772 1 254 Major Intrinsic Protein MIP AT1G73190 63.060 1.28e-111 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01772 K09873 - gmx:100797632 407.142