Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01746 ATGGCAACTAGACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCAATGCCTATTGTTTAGTTGCTATTGGAGGTTCTGAAAACTTCTACAGTGCATTTGAGACTGAGTTAGCAGATGTTATCCCTGTGATCAAGACCTCCATTGGTGGCACCCGTATTGTTGGTCGTCTTTGTGTTGGAAACAAGAATGGCCTTCTCTTGCCCCATACCACCACAGACCAAGAGCTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCGTATAGAAGAAAGATTGTCTGCATTGGGAAATTGTATAGCATGTAATGACCATGTGGCTCTCACCCATACTGATCTTGACAAGGAAACTGAGGAGATGGTTGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACTATTGCGGGTAATATTCTTGTTGGCAGTTACTGTGCATTCTCCAACAGGGGTGGTTTGGTCCACCCTCATACTTCCATTGAAGACTTGGATGAACTTTCTACCCTTCTTCAGGTTCCTTTGGTTGCTGGGACTGTCAATCGTGGTAGTGAAGTGATAGCTGCTGGTATGACAGTAAATGATTGGACAGCATTTTGTGGTTCAGACACCACAGCAACCGAGCTCTCTGTGATTGAGAGTGTTTTTAAGCTGAGAGAAGCTCAACCTAGTGCCATTGTCGATGAGATGAGGAAATCACTAGTCGATACTTACGTCTAA 738 0.4322 MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFETELADVIPVIKTSIGGTRIVGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDKETEEMVADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLVDTYV* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01746 245 NCBIfam translation initiation factor IF-6 4 224 IPR002769 GO:0042256|GO:0043022
Phac7g01746 245 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
Phac7g01746 245 Gene3D - 1 225 - -
Phac7g01746 245 CDD IF6 2 223 IPR002769 GO:0042256|GO:0043022
Phac7g01746 245 SUPERFAMILY Pentein 1 224 - -
Phac7g01746 245 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256|GO:0043022
Phac7g01746 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 244 IPR002769 GO:0042256|GO:0043022
Phac7g01746 245 FunFam Eukaryotic translation initiation factor 6 1 225 - -
Phac7g01746 245 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
Phac7g01746 245 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01746 Phac-Chr7 14633661 14637734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01746 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 91.429 1.00e-174 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01746 K03264 - gmx:100777602 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac4g01733 4 44515210 44518585 Phac7g01746 7 14633661 14637734 PCT