Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01731 ATGGATTTCTGGGATCGCCTATGCAAGACTCTTGGAGTCAGAAAAGTGAGCGTGATGGATGTTTCAAAGAAATATGGGTTAGAGTATCGCTTGCTCCATGCCATTATGAAGGGACACCCATGGTATGGCGACTGGGGTTATAAATTTGGCTCTGGTAGCTATTGTCTCACGCATGAAGCATACAAGTCTGCCGTTGAAAACCTATCCAACCTACCCTTGTCCACCTTTTCCCAGGGACAGATGCCGATGCCCCATTCCCGTGTTCAGGACATGATAAAATACTTCCAGTCTTTGTCAGAGCATGAACTTGTAAATATAAGAGACCTCTTTTGTTTCATAATAGGTTTGATTGGTGATGCTCGCAAGAGTGTATCAAATGTAGATGACACAACCTGCAAGAAGCGTCGTTTTAATGCTTCTGGACTGTCAATTTCTTGGGAGAAGACTGACATTGAACGTGTGGAGCAAGCTATGATCAGAGTGCTGCGTGCAGTGTCCGAGTCTAAGTGGGTGAACTGGCGTGCTCTTAGGGGTGCGGCCTGCAAGTTAGGCTCTCCAGAACTGCTTGATTATTGCCTGGGAGAACTGGGAGGAAAAATGGTCTATGGTGGAATGGTTGTTAATAGCCGATGCAATACTCAAACTGGAGTTTATGAGTACAGACTCGAGGCTGCCACTGGTGCTTGCTATGGAATTCTAGCGAACAATAACTCTTCAGCCTCGAAGTATCCATCTGAAGAAAACCTCCTACAATGCTTAAGATATTTATACGACTCTTTGCTTCATCCTCAGATGATGGTCAACTATGTTGAAGCAGGGACAAGGACTCTTGCGATGAGCTCAGTTCAGAAGCTTTTTGACTGCAAGCAGTTTGTAAAAGATTATAGTCCTGAGTTGTTGCCTTTGTCAGATTTGCACAAGTTACGCATCTCATGTCAGGTTGAACTCGTAGATGAATCTGAAGATCCTGAAGTTATTGCCCCACCGGAATTAATAGTACTGCCCATGAATGCGACGGTGGCCGAGCTTAAAAGTCAAGCAGCGAATGCTTTTCAAGATGTATATCTAATGTTCAGAAGATTTCAAGTTGATGAGCTAGAAGGCTATAGCGGTGTTGAAGATTCCACCCTGGTCAAGCTCTTGTTAGGATCGAAAGATGTAGTTTGTGTACGAGGAAGATGCATTGGGAAGAATGGGTTAAGTAAGTTCCGGATGGAACGGGGACTTGAGAGGTGGACTGTAGATTGCAGCTGTGGGGCGAAGGATGACGATGGGGAGAGAATGTTGGCGTGCGATATATGTGGAGTGTGGCGGCATACTAGGTGTTCTGACATCCATGATACTGATCCTGTTCCAGCACGTTTTGTTTGCCTCAAATGCCAAACCTCTGAATCAAAACTCAAATCTGGGGGGCACTGCAAAGATGAGACTGTCACTAACGTTAGCACTTCAACTAGTTGTTTCGGAAAACCCTTCCCAGTGCCATCAGATGTCAATTAG 1500 0.4513 MDFWDRLCKTLGVRKVSVMDVSKKYGLEYRLLHAIMKGHPWYGDWGYKFGSGSYCLTHEAYKSAVENLSNLPLSTFSQGQMPMPHSRVQDMIKYFQSLSEHELVNIRDLFCFIIGLIGDARKSVSNVDDTTCKKRRFNASGLSISWEKTDIERVEQAMIRVLRAVSESKWVNWRALRGAACKLGSPELLDYCLGELGGKMVYGGMVVNSRCNTQTGVYEYRLEAATGACYGILANNNSSASKYPSEENLLQCLRYLYDSLLHPQMMVNYVEAGTRTLAMSSVQKLFDCKQFVKDYSPELLPLSDLHKLRISCQVELVDESEDPEVIAPPELIVLPMNATVAELKSQAANAFQDVYLMFRRFQVDELEGYSGVEDSTLVKLLLGSKDVVCVRGRCIGKNGLSKFRMERGLERWTVDCSCGAKDDDGERMLACDICGVWRHTRCSDIHDTDPVPARFVCLKCQTSESKLKSGGHCKDETVTNVSTSTSCFGKPFPVPSDVN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01731 499 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 401 467 IPR013083 -
Phac7g01731 499 SUPERFAMILY FYVE/PHD zinc finger 404 463 IPR011011 -
Phac7g01731 499 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 1 475 - -
Phac7g01731 499 CDD PHD_MMD1_like 415 460 - -
Phac7g01731 499 SMART PHD_3 415 461 IPR001965 -
Phac7g01731 499 Pfam PHD-finger 416 462 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01731 Phac-Chr7 14439781 14444825 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01731 1 460 PHD Transcription Factor Family AT5G22260 29.065 5.63e-63 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac7g01731 PHD 6.6e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01731 K26271 - gmx:100818189 917.916