Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01730 ATGCTTTCTATCTTCAGATGCAAGTCTTGCAACCACGTGACTACCACTGATGATGTTGAGGACTGGGTGTACCACCAGTTAGAGAACACGACTCATCTTTTACACGGCGTAGTCCATGGCAATGGATATGGGCACCTTCTTCGGGTTAATGGCAGAGAAGGGGGCTCTAGATTTCTTTCTGGTTGTCATATTATGGATTTCTGGGATCGCCTATGCAAGACTCTTGGAGTCAGAAAAGTGAGCGTGATGGATGTTTCAAAGAAATATGGGTTAGAGTATCGCTTGCTCCATGCCATTATGAAGGGACACCCATGGTATGGCGACTGGGGTTATAAATTTGGCTCTGGTAGCTATTGTCTCACGCATGAAGCATACAAGTCTGCCGTTGAAAACCTATCCAACCTACCCTTGTCCACCTTTTCCCAGGGACAGATGCCGATGCCCCATTCCCGTGTTCAGGACATGATAAAATACTTCCAGTCTTTGTCAGAGCATGAACTTGTAAATATAAGAGACCTCTTTTGTTTCATAATAGGTTTGATTGGTGATGCTCGCAAGAGTGTATCAAATGTAGATGACACAACCTGCAAGAAGCGTCGTTTTAATGCTTCTGGACTGTCAATTTCTTGGGAGAAGACTGACATTGAACGTGTGGAGCAAGCTATGATCAGAGTGCTGCGTGCAGTGTCCGAGTCTAAGTGGGTGAACTGGCGTGCTCTTAGGGGTGCGGCCTGCAAGTTAGGCTCTCCAGAACTGCTTGATTATTGCCTGGGAGAACTGGGAGGAAAAATGGTCTATGGTGGAATGGTTGTTAATAGCCGATGCAATACTCAAACTGGAGTTTATGAGTACAGACTCGAGGCTGCCACTGGTGCTTGCTATGGAATTCTAGCGAACAATAACTCTTCAGCCTCGAAGTATCCATCTGAAGAAAACCTCCTACAATGCTTAAGATATTTATACGACTCTTTGCTTCATCCTCAGATGATGGTCAACTATGTTGAAGCAGGGACAAGGACTCTTGCGATGAGCTCAGTTCAGAAGCTTTTTGACTGCAAGCAGTTTGTAAAAGATTATAGTCCTGAGTTGTTGCCTTTGTCAGATTTGCACAAGTTACGCATCTCATGTCAGGTTGAACTCGTAGATGAATCTGAAGATCCTGAAGTTATTGCCCCACCGGAATTAATAGTACTGCCCATGAATGCGACGGTGGCCGAGCTTAAAAGTCAAGCAGCGAATGCTTTTCAAGATGTATATCTAATGTTCAGAAGATTTCAAGTTGATGAGCTAGAAGGCTATAGCGGTGTTGAAGATTCCACCCTGGTCAAGCTCTTGTTAGGATCGAAAGATGTAGTTTGTGTACGAGGAAGATGCATTGGGAAGAATGGGTTAAGTAAGTTCCGGATGGAACGGGGACTTGAGAGGTGGACTGTAGATTGCAGCTGTGGGGCGAAGGATGACGATGGGGAGAGAATGTTGGCGTGCGATATATGTGGAGTGTGGCGGCATACTAGGTGTTCTGACATCCATGATACTGATCCTGTTCCAGCACGTTTTGTTTGCCTCAAATGCCAAACCTCTGAATCAAAACTCAAATCTGGGGGGCACTGCAAAGATGAGACTGTCACTAACGTTAGCACTTCAACTAGTTGTTTCGGAAAACCCTTCCCAGTGCCATCAGATGTCAATTAG 1692 0.4527 MLSIFRCKSCNHVTTTDDVEDWVYHQLENTTHLLHGVVHGNGYGHLLRVNGREGGSRFLSGCHIMDFWDRLCKTLGVRKVSVMDVSKKYGLEYRLLHAIMKGHPWYGDWGYKFGSGSYCLTHEAYKSAVENLSNLPLSTFSQGQMPMPHSRVQDMIKYFQSLSEHELVNIRDLFCFIIGLIGDARKSVSNVDDTTCKKRRFNASGLSISWEKTDIERVEQAMIRVLRAVSESKWVNWRALRGAACKLGSPELLDYCLGELGGKMVYGGMVVNSRCNTQTGVYEYRLEAATGACYGILANNNSSASKYPSEENLLQCLRYLYDSLLHPQMMVNYVEAGTRTLAMSSVQKLFDCKQFVKDYSPELLPLSDLHKLRISCQVELVDESEDPEVIAPPELIVLPMNATVAELKSQAANAFQDVYLMFRRFQVDELEGYSGVEDSTLVKLLLGSKDVVCVRGRCIGKNGLSKFRMERGLERWTVDCSCGAKDDDGERMLACDICGVWRHTRCSDIHDTDPVPARFVCLKCQTSESKLKSGGHCKDETVTNVSTSTSCFGKPFPVPSDVN* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01730 563 CDD PHD_MMD1_like 479 524 - -
Phac7g01730 563 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 7 539 - -
Phac7g01730 563 SUPERFAMILY FYVE/PHD zinc finger 468 527 IPR011011 -
Phac7g01730 563 SMART PHD_3 479 525 IPR001965 -
Phac7g01730 563 Pfam PHD-finger 480 526 IPR019787 -
Phac7g01730 563 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 465 531 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01730 Phac-Chr7 14439781 14444825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01730 25 524 PHD Transcription Factor Family AT5G22260 30.639 1.70e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac7g01730 PHD 7.8e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01730 K26271 - gmx:100818189 1041.18