Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01729 ATGTGCTGTGGAGACATCTTGCATTTGTCAGAATCTAAATGCAAGTCTTGCAACCACGTGACTACCACTGATGATGTTGAGGACTGGGTGTACCACCAGTTAGAGAACACGACTCATCTTTTACACGGCGTAGTCCATGGCAATGGATATGGGCACCTTCTTCGGGTTAATGGCAGAGAAGGGGGCTCTAGATTTCTTTCTGGTTGTCATATTATGGATTTCTGGGATCGCCTATGCAAGACTCTTGGAGTCAGAAAAGTGAGCGTGATGGATGTTTCAAAGAAATATGGGTTAGAGTATCGCTTGCTCCATGCCATTATGAAGGGACACCCATGGTATGGCGACTGGGGTTATAAATTTGGCTCTGGTAGCTATTGTCTCACGCATGAAGCATACAAGTCTGCCGTTGAAAACCTATCCAACCTACCCTTGTCCACCTTTTCCCAGGGACAGATGCCGATGCCCCATTCCCGTGTTCAGGACATGATAAAATACTTCCAGTCTTTGTCAGAGCATGAACTTGTAAATATAAGAGACCTCTTTTGTTTCATAATAGGTTTGATTGGTGATGCTCGCAAGAGTGTATCAAATGTAGATGACACAACCTGCAAGAAGCGTCGTTTTAATGCTTCTGGACTGTCAATTTCTTGGGAGAAGACTGACATTGAACGTGTGGAGCAAGCTATGATCAGAGTGCTGCGTGCAGTGTCCGAGTCTAAGTGGGTGAACTGGCGTGCTCTTAGGGGTGCGGCCTGCAAGTTAGGCTCTCCAGAACTGCTTGATTATTGCCTGGGAGAACTGGGAGGAAAAATGGTCTATGGTGGAATGGTTGTTAATAGCCGATGCAATACTCAAACTGGAGTTTATGAGTACAGACTCGAGGCTGCCACTGGTGCTTGCTATGGAATTCTAGCGAACAATAACTCTTCAGCCTCGAAGTATCCATCTGAAGAAAACCTCCTACAATGCTTAAGATATTTATACGACTCTTTGCTTCATCCTCAGATGATGGTCAACTATGTTGAAGCAGGGACAAGGACTCTTGCGATGAGCTCAGTTCAGAAGCTTTTTGACTGCAAGCAGTTTGTAAAAGATTATAGTCCTGAGTTGTTGCCTTTGTCAGATTTGCACAAGTTACGCATCTCATGTCAGGTTGAACTCGTAGATGAATCTGAAGATCCTGAAGTTATTGCCCCACCGGAATTAATAGTACTGCCCATGAATGCGACGGTGGCCGAGCTTAAAAGTCAAGCAGCGAATGCTTTTCAAGATGTATATCTAATGTTCAGAAGATTTCAAGTTGATGAGCTAGAAGGCTATAGCGGTGTTGAAGATTCCACCCTGGTCAAGCTCTTGTTAGGATCGAAAGATGTAGTTTGTGTACGAGGAAGATGCATTGGGAAGAATGGGTTAAGTAAGTTCCGGATGGAACGGGGACTTGAGAGGTGGACTGTAGATTGCAGCTGTGGGGCGAAGGATGACGATGGGGAGAGAATGTTGGCGTGCGATATATGTGGAGTGTGGCGGCATACTAGGTGTTCTGACATCCATGATACTGATCCTGTTCCAGCACGTTTTGTTTGCCTCAAATGCCAAACCTCTGAATCAAAACTCAAATCTGGGGGGCACTGCAAAGATGAGACTGTCACTAACGTTAGCACTTCAACTAGTTGTTTCGGAAAACCCTTCCCAGTGCCATCAGATGTCAATTAG 1713 0.4524 MCCGDILHLSESKCKSCNHVTTTDDVEDWVYHQLENTTHLLHGVVHGNGYGHLLRVNGREGGSRFLSGCHIMDFWDRLCKTLGVRKVSVMDVSKKYGLEYRLLHAIMKGHPWYGDWGYKFGSGSYCLTHEAYKSAVENLSNLPLSTFSQGQMPMPHSRVQDMIKYFQSLSEHELVNIRDLFCFIIGLIGDARKSVSNVDDTTCKKRRFNASGLSISWEKTDIERVEQAMIRVLRAVSESKWVNWRALRGAACKLGSPELLDYCLGELGGKMVYGGMVVNSRCNTQTGVYEYRLEAATGACYGILANNNSSASKYPSEENLLQCLRYLYDSLLHPQMMVNYVEAGTRTLAMSSVQKLFDCKQFVKDYSPELLPLSDLHKLRISCQVELVDESEDPEVIAPPELIVLPMNATVAELKSQAANAFQDVYLMFRRFQVDELEGYSGVEDSTLVKLLLGSKDVVCVRGRCIGKNGLSKFRMERGLERWTVDCSCGAKDDDGERMLACDICGVWRHTRCSDIHDTDPVPARFVCLKCQTSESKLKSGGHCKDETVTNVSTSTSCFGKPFPVPSDVN* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01729 570 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 2 546 - -
Phac7g01729 570 CDD PHD_MMD1_like 486 531 - -
Phac7g01729 570 SUPERFAMILY FYVE/PHD zinc finger 475 534 IPR011011 -
Phac7g01729 570 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 472 538 IPR013083 -
Phac7g01729 570 Pfam PHD-finger 487 533 IPR019787 -
Phac7g01729 570 SMART PHD_3 486 532 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01729 Phac-Chr7 14439781 14444825 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01729 32 531 PHD Transcription Factor Family AT5G22260 30.827 1.90e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac7g01729 PHD 7.9e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01729 K26271 - gmx:100818189 1067.37