Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01716 ATGACGTCTTCATCATCCAAACTCCCACGGATGTACGATGTGCTCATAAACTTTAATGGAGAAGACATCCAAAGGAAATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTGTTGGCTTCACCACCCCAATGCACTCAACCCAATTCACATCCAACAACCTATTCTCAATCTCTCTCCTTCAACAAATCATCAAATGGCACCAAACTTATTGCCGACATCTTCTGCCCGTATATTACGAAATTCAGCCATCTGATGTACGTCTTCAGAAGAATGAGAGAAACTCTTGGGCAGTGCCTGTGAAACTGCGTTCAGTCAGAAGAGAACCATCAAGACTGCTGCTGAAACTCACTGGAAGTTATGAGTACATTTCTAGGAAACTGAGAGGGATCAGTTTGCAAGGGTCTTTTTCAGAATGCGTACTTGACGGCTTTCATCTGCATGATGCAATAGCAATTCACTTAAAATACAGTCATCTTCGACTCCTCTTGAAAGAACCTCAGGTTTTGAGGAGGCTGAAAGTCCTTAATCTTAGTCACTCCAAGTATTTAATAGAAACCCCTGACTTTTCCGGACTACGTAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAGGATTGCGCCAAGTACACCAATCTATTGGATGTCTCTGCAATCTTACACTGCTAAATTTGAAGGACTGTACAAATCTGAGCAATCTCCCCGCAGAGGTATATATGTTGAAATCTTTAAAAACTCTCATTCTCTCTGGGTGTTCGATGATTGACATATTGGAAAAAGATACAGTGCAAATGAAATCCTTGATAACTCTAATTGCTGAAAACACAGCTGTTAAACAAGTGCCCTTTTCAATTGTAAGATCAAAAAGCATTGGATATATATCCCTACGTGGATTTGAGAGATTGCCACGTAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCCCCAACAACGAATTTCATATCTTATATTAATTCGTTTTGCATGGATATGGAGGATAATAGTTGGGATGATATTACGCCATTGCTTAGCAGCCTGCCAAATCTTCGAAGTGTTTTGGTGCAATGTGACACCGAGTTTCAACTATCTAAGCAATTCAAAAATATTCTGGTAGAATATTTTGCAACTACTACAGAATCAGGAATTTCAAAGCAGCAGTTCAGGTCTTCTTTGATTGGTGTTGGAGCATACCATGAATTCTTCAATGCTGTCAGCCATAACGTATCAAAGGTAACAGTAAGCAGTGAGTCATGTGATGTTTCTCTCCCTGGTGACAATGATCCTTATAGGTTGGCCCATATGGGTGAGGAACATTCTGTTTCTTTCACTGTGCCTCTAGATCGTGACTTGAAGGGAATGGTTTTGTGTTATATTTATTTATCAACCCCTGAAATCGAGGCCACTGGATATCTTAGAAGTATCTTAATTGTTAATTACACAAAGTGCACATTGCATATACACAAGCATGGCACAGTAATTTCCTTTAATTATATAGATTGGCAGGGTATAGTGTCAAATTTAGGATCTGGAGACAAGGTGGAGATTTTTTTGAGTTTTGGTAATGGATTGGTTGTCAAGAAAACAGTTGTCTATCTCATATGTGGTGAATTAAATTACTTGAGACAAGAGCCTAAGCCAAAGGAAAATCCTCTCCTTAAATTCATTAAGAAAATTGTAATGTGA 1683 0.391 MTSSSSKLPRMYDVLINFNGEDIQRKFVSHLDSALSAVGFTTPMHSTQFTSNNLFSISLLQQIIKWHQTYCRHLLPVYYEIQPSDVRLQKNERNSWAVPVKLRSVRREPSRLLLKLTGSYEYISRKLRGISLQGSFSECVLDGFHLHDAIAIHLKYSHLRLLLKEPQVLRRLKVLNLSHSKYLIETPDFSGLRSLEQLILKDCPGLRQVHQSIGCLCNLTLLNLKDCTNLSNLPAEVYMLKSLKTLILSGCSMIDILEKDTVQMKSLITLIAENTAVKQVPFSIVRSKSIGYISLRGFERLPRNLFPSIIRSWMSPTTNFISYINSFCMDMEDNSWDDITPLLSSLPNLRSVLVQCDTEFQLSKQFKNILVEYFATTTESGISKQQFRSSLIGVGAYHEFFNAVSHNVSKVTVSSESCDVSLPGDNDPYRLAHMGEEHSVSFTVPLDRDLKGMVLCYIYLSTPEIEATGYLRSILIVNYTKCTLHIHKHGTVISFNYIDWQGIVSNLGSGDKVEIFLSFGNGLVVKKTVVYLICGELNYLRQEPKPKENPLLKFIKKIVM* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01716 560 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 112 279 IPR044974 GO:0006952
Phac7g01716 560 Gene3D Ribonuclease Inhibitor 121 380 IPR032675 -
Phac7g01716 560 Gene3D - 5 63 IPR035897 -
Phac7g01716 560 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 91 IPR035897 -
Phac7g01716 560 SUPERFAMILY L domain-like 114 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01716 Phac-Chr7 14214076 14218065 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01716 183 302 WRKY Transcription Factor Family AT5G45050 33.871 9.25e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01716 - - pvu:PHAVU_010G025300g 675.241