Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01698 ATGGAGGGAAGAGAGAGTTTTGGTGTTGTGGTGGGTGATGAAGCCCCGGAGAGCTTCCATGTGGCTCCTAGAATAATTGAGAACAACTTGGACTTTTCAAGGGCCGTCGTGCCGGTGCCTTCGCCGGCGACGGAGGGGAAAAAGAAGAGAGGGAGACCGAGGAAGTATGGGCCGGACGGGAAGGTGGCTATGGGGCCGGTGACGGCGCTTTCGCCGATGCCGATTTCTTCGTCGATTCCGTTGACCGGCGAGTTCTCCGCTTGGAAGAGAGGTAGAGGAAGGCCAGTTGAATCTATCAAAAAGTCATCGTTCAAGTTTGAGGTTGAAAGCCCTGTTCAAGGTGATGGAATAGCATACTCAGTTGGTGCCAATTTCACACCACATGTGCTCACAGTAAATGCTGGCGAGGATGTCACCATGAAAATCATGTCCTTCTCACAACAAGGATCACGTGCTATATGCATTCTCTCTGCAACTGGAACAATTTCAAATGTTACACTTCGTCAACCATCTTCTTGTGGGGGTACTTTAACATATGAGGGAAGGTTTGAAATTCTTTCCTTGTCTGGTTCCTTTATGCCAACTGAGAATGGAATTACAAGAAGCAGATCTGGTGGAATGAGTGTCTCTTTGGCCGGTCCAGATGGTAGAGTAATGGGGGGTGGACTTGCTGGTTTGCTGGTAGCTGCTGGTCCAGTTCAGGTTGTGGTGGGCAGTTTTCTTCCTGGTCACCAGTTGGAGCATAAAAACAAGAAGCAAAGGGTGGAGTTTATATCAACTATTACCCCTTCACCTGTTAATATCATCTCTAGTGAGGAACTAAAAGTCAGTTTTGGTGGAGTGAAGCCTATTATGACACCTGCTGCTTTTCAAGAAGAGAATATTGTTTCTTTTAACAATGGTCAAGACTCTAGGAACTCATCTGCTGATGACAAAGATCCTTTGCCCGACAAGGAGTCTAATCTAAGCCAATCAAAAGCTGAGGCTGCATGCTAA 996 0.4719 MEGRESFGVVVGDEAPESFHVAPRIIENNLDFSRAVVPVPSPATEGKKKRGRPRKYGPDGKVAMGPVTALSPMPISSSIPLTGEFSAWKRGRGRPVESIKKSSFKFEVESPVQGDGIAYSVGANFTPHVLTVNAGEDVTMKIMSFSQQGSRAICILSATGTISNVTLRQPSSCGGTLTYEGRFEILSLSGSFMPTENGITRSRSGGMSVSLAGPDGRVMGGGLAGLLVAAGPVQVVVGSFLPGHQLEHKNKKQRVEFISTITPSPVNIISSEELKVSFGGVKPIMTPAAFQEENIVSFNNGQDSRNSSADDKDPLPDKESNLSQSKAEAAC* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01698 331 SMART AT_hook_2 89 101 IPR017956 GO:0003677
Phac7g01698 331 SMART AT_hook_2 47 59 IPR017956 GO:0003677
Phac7g01698 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 309 IPR039605 GO:0003680
Phac7g01698 331 MobiDBLite consensus disorder prediction 298 331 - -
Phac7g01698 331 Gene3D - 127 258 - -
Phac7g01698 331 ProSiteProfiles PPC domain profile profile. 122 264 IPR005175 -
Phac7g01698 331 MobiDBLite consensus disorder prediction 37 62 - -
Phac7g01698 331 Pfam Plants and Prokaryotes Conserved (PCC) domain 127 240 IPR005175 -
Phac7g01698 331 FunFam AT-hook motif nuclear-localized protein 1-like 127 257 - -
Phac7g01698 331 CDD DUF296 126 240 IPR005175 -
Phac7g01698 331 SUPERFAMILY AF0104/ALDC/Ptd012-like 124 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01698 Phac-Chr7 13886599 13893615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01698 43 315 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 59.091 3.55e-92 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01698 - - gmx:100776862 569.696