Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01678 ATGGAACCGCCATTGCAACAGCAACCGCCGCCGCCGCCACCACCGCGCTCCCTCATCATCCTCGGAAAATACCAGCTGACGCGCCTCCTTGGCCGTGGCAGCTTCGCCAAGGTCTACCAGGCACGATCCCTAATCGACGGCGCCACCTTCGCCGTCAAAATCATCGACAAGGCCAAAACCGTCGACGCCCGCATGGAGCCCCGCATAATCCGAGAGATCGACGCCATGCGCCGCCTCCACCACCACCCTAACATCCTTAAAATCCACGAAGTCATGGCCACGAAGACCAAAATCCACCTCATCGTTGAGCTCGCCACCGGTGGAGAGCTCTTCGCCAGAATCTCCCGTCGAGGCCGTTTGTCGGAGTCCACGGCGCGCCGGTACTTCCAGCAGCTGGTCTCCGCGCTCCGGTTCTGCCACCGCAACGGTGTGGCGCACCGCGACCTCAAGCCTCAGAACCTCCTCCTCGACGGCGAAGGCAACCTCAAGGTCTCCGACTTCGGCCTCTCCGCTCTGCCGGAGCATCTCAAGAACGGCCTTCTCCACACCGCATGTGGCACGCCAGCGTATACAGCGCCGGAGATCCTCCGCCAGAACGGCGGCTACGACGGGTCCAAGGCCGACGCCTGGTCCTGCGGCCTCATTCTCTACGTCTTCCTCGCCGGCTACCTTCCGTTTGACGACACGAACATTCCGGCGATGTGCAAGAGGATTTCCCGGCGAGATTACCAGTTCCCTGACTGGATAACAAAACCGGCACGATATGTTATATATAAATTACTGGACCCGAACCCGGAAAGCAGAATGGGGTTGGAGGCTCTGTTTGGGAACTCGTGGTTCAAGAAATCGTTAAGACCGGAAACGGCGGAGGAAAGCGCGTTTGGGTGGGATAACGTTTATGTGAAGGGTTGTTACTACGAAGGGGCTAAGTGTTCGGGCGTGAACGCGTTTGATATAATATCAATGTCTTCGGGTTTGAATTTAACGAGGTTGTTTGAAACGACGTCAGATGGGGGTAGTAGGAGGGAAAAGAGATTCACTTCGAGTGCGCGCGTGGAGGTGGTGGAGGAGAAGGTTAAGGAAGTGGGTGGGGTTTTGGGGTTTAAGCTGGAGGCTGGGAAAACCATTAACGGTGCAATTGCCTTGTTAAAAGGAAAGGTCGCTTTGGTGTTTGAGGTGCTTCAGATTGTGCCCGATCAGCTTCTTTTGGTGGCTGTGAAGGTCGTGGAGGGTGGGTTAGAGTTTGAGGAGCATCACTGGGGCCATTGGAAAAATGCCTTGCAAGATCTCGTCCTTTCTTGGCACAACGATGAATCCTGA 1320 0.5629 MEPPLQQQPPPPPPPRSLIILGKYQLTRLLGRGSFAKVYQARSLIDGATFAVKIIDKAKTVDARMEPRIIREIDAMRRLHHHPNILKIHEVMATKTKIHLIVELATGGELFARISRRGRLSESTARRYFQQLVSALRFCHRNGVAHRDLKPQNLLLDGEGNLKVSDFGLSALPEHLKNGLLHTACGTPAYTAPEILRQNGGYDGSKADAWSCGLILYVFLAGYLPFDDTNIPAMCKRISRRDYQFPDWITKPARYVIYKLLDPNPESRMGLEALFGNSWFKKSLRPETAEESAFGWDNVYVKGCYYEGAKCSGVNAFDIISMSSGLNLTRLFETTSDGGSRREKRFTSSARVEVVEEKVKEVGGVLGFKLEAGKTINGAIALLKGKVALVFEVLQIVPDQLLLVAVKVVEGGLEFEEHHWGHWKNALQDLVLSWHNDES* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01678 439 Gene3D Transferase(Phosphotransferase) domain 1 17 305 - -
Phac7g01678 439 SMART serkin_6 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01678 439 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Phac7g01678 439 SUPERFAMILY Protein kinase-like (PK-like) 20 286 IPR011009 -
Phac7g01678 439 Pfam NAF domain 314 370 IPR004041 GO:0007165
Phac7g01678 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Phac7g01678 439 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 19 374 - -
Phac7g01678 439 FunFam Non-specific serine/threonine protein kinase 15 302 - -
Phac7g01678 439 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Phac7g01678 439 CDD CIPK_C 315 428 - -
Phac7g01678 439 Gene3D Kinase associated domain 1, KA1 311 432 - -
Phac7g01678 439 FunFam Non-specific serine/threonine protein kinase 17 109 - -
Phac7g01678 439 ProSiteProfiles Protein kinase domain profile. 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01678 439 Pfam Protein kinase domain 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01678 Phac-Chr7 13535298 13537319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01678 1 436 CBL-interacting serine-threonine protein kinases AT4G14580 57.175 1.03e-166 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phac7g01678 Pkinase 4.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01678 K12761 - gmx:100784173 717.227