Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01669 ATGGCAACTATGCTGGGAAAGGAGCATCATCTCAACCTCAAGGAGACTGAGCTTTGCCTAGGTCTGCCTGGTGCTGGTGGTGGTGGTGCTGGTGCTGGTGGTGGCGGCGGCTCTGAGGTGGAAACACCAAGGGCTTCTGGGAAGAGAGGGTTCTCTGAGACAGTTGATCTGAAGCTTAATCTTCAGGCCAAGGAAGATCTCAACGAGAATCTGAAGAATGCCCCAGAGGAGAAGACTCTCCTTAAGGATCCTACCAAGCAACCGGCTAAAGCTCAAGTAGTTGGTTGGCCACCAGTGAGGTCATACAGAAAGAACATGATGACCCAGAAGGTTAGCACTGAGGATGGAGCTGAGAAGACAACAAGCAGCACTGCTTCTGGGGCGTTTGTCAAAGTTTCCATGGATGGAGCACCTTACCTTCGCAAGGTGGACCTCACAATGTACAAAAGCTACAAAGATTTATCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACCATGGGTAATTATGGGGCCCAAGGGATGATAGACTTCATGAATGAGCGCAAGTTGATGGATCTTCTTAACAGCTCCGAGTATGTGCCAACCTATGAAGATAAGGATGGTGACTGGATGCTCGTGGGTGATGTCCCATGGGAGATGTTTGTTGAGTCATGCAAGCGTCTGCGAATAATGAAAGGATCAGAGGCAATTGGACTTGCGCCAAGAGCAATGGAAAAATGCAAAAGCAGAAGCTGA 738 0.4919 MATMLGKEHHLNLKETELCLGLPGAGGGGAGAGGGGGSEVETPRASGKRGFSETVDLKLNLQAKEDLNENLKNAPEEKTLLKDPTKQPAKAQVVGWPPVRSYRKNMMTQKVSTEDGAEKTTSSTASGAFVKVSMDGAPYLRKVDLTMYKSYKDLSDALAKMFSSFTMGNYGAQGMIDFMNERKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKSRS* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01669 245 SUPERFAMILY CAD & PB1 domains 124 226 - -
Phac7g01669 245 FunFam Auxin-responsive protein 122 237 - -
Phac7g01669 245 Pfam AUX/IAA family 44 236 IPR033389 -
Phac7g01669 245 Gene3D - 122 239 - -
Phac7g01669 245 MobiDBLite consensus disorder prediction 27 51 - -
Phac7g01669 245 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 232 IPR003311 GO:0005634|GO:0006355
Phac7g01669 245 ProSiteProfiles PB1 domain profile. 127 227 IPR000270 GO:0005515
Phac7g01669 245 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01669 Phac-Chr7 13363760 13366667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01669 112 235 B3 DNA Binding Superfamily AT4G23980 32.258 6.71e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phac7g01669 AUX_IAA 6.8e-83 CL0072