Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01607 ATGACCCACATGTTTAGGATAATGGCCGAGGAATTTGGGTACCAAAGAAGTGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAATATTACAAGAAGACGAAGGAAGGTAAAGGCAGTAGACAAGATGGGAAGCACTACAGGTTCTTCAGGCAGCTTGAAGCAATATGTGGAGACCAAGCAAACACAAATCATGCCTCAACTTCAGAGAAAGGCCAACGTGCTGGTGGAAACAATGCTAATATTCAAACACCTACCTTCACAGTTAACCAAGACCACAATGTGGATTCTAATAATAACCCCAAGTGCTCAGAGAGCCTGAGCATCACAAACTCATCTGAATTGGAGACATCCTCATCTGAAAACAACGAGGAGGATCTTTCAGCCATTGCATTCATGATGAGGCAGCCAAGGGAGAAGCAGAAAGCGTTGGATGAAAGACACAGTGAGCATAGGAGGTTAAGAAAAAGCTGGAGAGCCAAAGTGGAGGAGATTGTGGATTCCCACATGAGGAAGATTATAGAGACTCAAGATGCTTGGATGGAGAGAATGTTGAGCGTTGTTGAACAAAGAGAGCAAGAGATGACATCTAAGGAGGAAGAAAGGAAGAGGAAAGAGTCAACGTGGTTTGACCAGCAGGTGCATGAACTGTGGGCTAAAGAGAAAGCATGGGTTGAAGCAAGAGATGCTGCATTGATAGAGGTTGTGAGGAAACACGTTGGGATAGGACTTGAAGCATTACCCCTGGATGAAGCTATGGTTGAAGAAGCAGCAAATAAGAACAAGGGCCAAGGAAAGATTGACAGCAGTGAATTTCCCTCGGAGGGTGTGGATCAAAGAAGTAGCAGTAGGTGGACAGAAATGGAGATTGCAAATTTGATACAGCTAAGGACTGGTTTTGAGCAACGATTCAGAGAAAATGGGTACTTGGAGAATGGCCTTTGGGATGAAATATCAGCAAAACTGGGTTGTTTGGGGTTTGATAGGAGTGGAAGTGAGTGCAAGCAAATATGGGATGAGATCAGCATCTCTCTGAGAAGGACAGTGGATGAGTGTGATGGTGGGAAAAGAAGGCCTTGGTATTTGGGACTTAAGGTGACGGATGATGATGATCTTTGA 1122 0.4403 MTHMFRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKGSRQDGKHYRFFRQLEAICGDQANTNHASTSEKGQRAGGNNANIQTPTFTVNQDHNVDSNNNPKCSESLSITNSSELETSSSENNEEDLSAIAFMMRQPREKQKALDERHSEHRRLRKSWRAKVEEIVDSHMRKIIETQDAWMERMLSVVEQREQEMTSKEEERKRKESTWFDQQVHELWAKEKAWVEARDAALIEVVRKHVGIGLEALPLDEAMVEEAANKNKGQGKIDSSEFPSEGVDQRSSSRWTEMEIANLIQLRTGFEQRFRENGYLENGLWDEISAKLGCLGFDRSGSECKQIWDEISISLRRTVDECDGGKRRPWYLGLKVTDDDDL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01607 373 ProSiteProfiles Myb-like domain profile. 278 343 IPR001005 -
Phac7g01607 373 Pfam Myb/SANT-like DNA-binding domain 284 355 IPR044822 -
Phac7g01607 373 Pfam Myb/SANT-like DNA-binding domain 6 57 IPR044822 -
Phac7g01607 373 MobiDBLite consensus disorder prediction 64 124 - -
Phac7g01607 373 Coils Coil 182 209 - -
Phac7g01607 373 MobiDBLite consensus disorder prediction 261 282 - -
Phac7g01607 373 MobiDBLite consensus disorder prediction 264 282 - -
Phac7g01607 373 CDD GT1 284 349 - -
Phac7g01607 373 FunFam Trihelix transcription factor GT-2 286 348 - -
Phac7g01607 373 Gene3D - 286 348 - -
Phac7g01607 373 Gene3D - 2 34 - -
Phac7g01607 373 PANTHER FI21293P1 6 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01607 Phac-Chr7 12298607 12301599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01607 6 348 Trihelix Transcription Factor Family AT5G03680 41.989 2.48e-69 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac7g01607 Myb_DNA-bind_4 9.1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01607 - - gmx:100787750 565.074