Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01606 ATGGGTGACCCATATGGGTTGCCGGAGGATCTCCGGCGTTTGATACCACCCAGAACCCATTTGAACCCTTCAAACACGCATCTACTTGAGCCACTGTGTCTTCACCATGGTCTCAGTGGTGTTGCTGCTGCTACCACAACTCCACCCAACACCTACGACCCTAACATGGTTGGGGACGTTTTCTTCCCTCGTGCCTTCACTCACTTTGCTCATCATCATGACTATTCCTCTTCTTCTGGTGTCCACCCTACTAATACTGCCACCGCTGCTGTCTCGGATCATGCATTCTGCAGCATGGAGAGTGCAGAGAAAGGGTGGTTTGGGTTTGATTCCGGGAACAACAGGTGGCCTAGACAGGAGACCCTTTCGCTTCTAGAGATCAGATCTCGTCTTGATTGCAAGTTCAGAGAGAATAATCAGAAAGCACCCTTGTGGAATGAGATTTCTAGGATAATGGCCGAGGAATTTGGGTACCAAAGAAGTGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAATATTACAAGAAGACGAAGGAAGGTAAAGGCAGTAGACAAGATGGGAAGCACTACAGGTTCTTCAGGCAGCTTGAAGCAATATGTGGAGACCAAGCAAACACAAATCATGCCTCAACTTCAGAGAAAGGCCAACGTGCTGGTGGAAACAATGCTAATATTCAAACACCTACCTTCACAGTTAACCAAGACCACAATGTGGATTCTAATAATAACCCCAAGTGCTCAGAGAGCCTGAGCATCACAAACTCATCTGAATTGGAGACATCCTCATCTGAAAACAACGAGGAGGATCTTTCAGCCATTGCATTCATGATGAGGCAGCCAAGGGAGAAGCAGAAAGCGTTGGATGAAAGACACAGTGAGCATAGGAGGTTAAGAAAAAGCTGGAGAGCCAAAGTGGAGGAGATTGTGGATTCCCACATGAGGAAGATTATAGAGACTCAAGATGCTTGGATGGAGAGAATGTTGAGCGTTGTTGAACAAAGAGAGCAAGAGATGACATCTAAGGAGGAAGAAAGGAAGAGGAAAGAGTCAACGTGGTTTGACCAGCAGGTGCATGAACTGTGGGCTAAAGAGAAAGCATGGGTTGAAGCAAGAGATGCTGCATTGATAGAGGTTGTGAGGAAACACGTTGGGATAGGACTTGAAGCATTACCCCTGGATGAAGCTATGGTTGAAGAAGCAGCAAATAAGAACAAGGGCCAAGGAAAGATTGACAGCAGTGAATTTCCCTCGGAGGGTGTGGATCAAAGAAGTAGCAGTAGGTGGACAGAAATGGAGATTGCAAATTTGATACAGCTAAGGACTGGTTTTGAGCAACGATTCAGAGAAAATGGGTACTTGGAGAATGGCCTTTGGGATGAAATATCAGCAAAACTGGGTTGTTTGGGGTTTGATAGGAGTGGAAGTGAGTGCAAGCAAATATGGGATGAGATCAGCATCTCTCTGAGAAGGACAGTGGATGAGTGTGATGGTGGGAAAAGAAGGCCTTGGTATTTGGGACTTAAGGTGACGGATGATGATGATCTTTGA 1554 0.4582 MGDPYGLPEDLRRLIPPRTHLNPSNTHLLEPLCLHHGLSGVAAATTTPPNTYDPNMVGDVFFPRAFTHFAHHHDYSSSSGVHPTNTATAAVSDHAFCSMESAEKGWFGFDSGNNRWPRQETLSLLEIRSRLDCKFRENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKGSRQDGKHYRFFRQLEAICGDQANTNHASTSEKGQRAGGNNANIQTPTFTVNQDHNVDSNNNPKCSESLSITNSSELETSSSENNEEDLSAIAFMMRQPREKQKALDERHSEHRRLRKSWRAKVEEIVDSHMRKIIETQDAWMERMLSVVEQREQEMTSKEEERKRKESTWFDQQVHELWAKEKAWVEARDAALIEVVRKHVGIGLEALPLDEAMVEEAANKNKGQGKIDSSEFPSEGVDQRSSSRWTEMEIANLIQLRTGFEQRFRENGYLENGLWDEISAKLGCLGFDRSGSECKQIWDEISISLRRTVDECDGGKRRPWYLGLKVTDDDDL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01606 517 CDD GT1 114 180 - -
Phac7g01606 517 Gene3D - 430 492 - -
Phac7g01606 517 Gene3D - 116 178 - -
Phac7g01606 517 SMART sant 112 175 IPR001005 -
Phac7g01606 517 SMART sant 426 489 IPR001005 -
Phac7g01606 517 Coils Coil 326 353 - -
Phac7g01606 517 ProSiteProfiles Myb-like domain profile. 114 173 IPR001005 -
Phac7g01606 517 MobiDBLite consensus disorder prediction 208 268 - -
Phac7g01606 517 FunFam Trihelix transcription factor GT-2 430 492 - -
Phac7g01606 517 MobiDBLite consensus disorder prediction 408 426 - -
Phac7g01606 517 CDD GT1 428 493 - -
Phac7g01606 517 MobiDBLite consensus disorder prediction 405 426 - -
Phac7g01606 517 ProSiteProfiles Myb-like domain profile. 422 487 IPR001005 -
Phac7g01606 517 Pfam Myb/SANT-like DNA-binding domain 428 499 IPR044822 -
Phac7g01606 517 Pfam Myb/SANT-like DNA-binding domain 114 201 IPR044822 -
Phac7g01606 517 FunFam trihelix transcription factor PTL-like 116 178 - -
Phac7g01606 517 PANTHER FI21293P1 78 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01606 Phac-Chr7 12298607 12301599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01606 115 492 Trihelix Transcription Factor Family AT5G03680 45.088 1.86e-90 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac7g01606 Myb_DNA-bind_4 4.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01606 - - gmx:100787750 827.394