Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01602 ATGGAGCGGGGTTGCCATGGTCTCGAACGCGTGACTGTAGCCAAATTTCCAACAAAGAAGTACAGTGACAAGTTTTTTGCTGCAGCAGAAAATTCTCAATGCACAGTCTGCCTCTCAGAATACCAAGGTGAGGATATGCTGCGTATCCTCCCTTATTGTGGACACTCTTTCCATGTGACCTGCATAGACCTATGGCTGCAGCAGAATTCCACATGTCCGGTGTGTCGGATATCGTTGCGTGAATTTCCAGATAGAAAATGGTTAATGCAACCCTTGTTCAGCTCTGCCTTACAACCTGGCATAGAATCCTTTGATACGCTTCATTATCACTGTATGATGGATGATAATGGATTACCAGCAAGAACCCCTGACAACCATGGGGTGAATCCTATAGAAGAAGATAATTTTCCAGCTGAGGGTGGTGGAGCAGTTTCTATGGACAATATCACATGTATAAGTGAGGGTGACTTCATTAAAGATGAGGCGAAGAAGCATGTAGAGAGTCCATCAAACTTCCAGAATTGA 525 0.4438 MERGCHGLERVTVAKFPTKKYSDKFFAAAENSQCTVCLSEYQGEDMLRILPYCGHSFHVTCIDLWLQQNSTCPVCRISLREFPDRKWLMQPLFSSALQPGIESFDTLHYHCMMDDNGLPARTPDNHGVNPIEEDNFPAEGGGAVSMDNITCISEGDFIKDEAKKHVESPSNFQN* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01602 174 PANTHER OS11G0150450 PROTEIN 1 132 - -
Phac7g01602 174 ProSiteProfiles Zinc finger RING-type profile. 34 76 IPR001841 -
Phac7g01602 174 FunFam E3 ubiquitin-protein ligase ATL6 1 82 - -
Phac7g01602 174 SUPERFAMILY RING/U-box 28 82 - -
Phac7g01602 174 Pfam Ring finger domain 33 76 IPR001841 -
Phac7g01602 174 SMART ring_2 34 75 IPR001841 -
Phac7g01602 174 CDD RING-H2_EL5-like 33 76 - -
Phac7g01602 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 83 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01602 Phac-Chr7 12256796 12260170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01602 7 83 C3H Transcription Factor Family AT4G10150 45.455 2.12e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01602 - - gmx:100794979 338.576