Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01561 ATGATGAATTTAAGGATTGTCTTCATGCCCCTGGTATTTTTTGAAATGGTGGTTTTGTTTGATAACATCAGGATGTGTAGGGCTTTGATGCCCGGGGATGACGAAAATTTGACAGATGAAGCAGTATGGGAAACACTTCCTCACTTCTGGATTTCAATATCCATGGTCTTCTTGATTGCTGCCACAGTGTTCACTCTTCTGAAGATATGTGGTGATGTTGCTGCTCTAGGCTGGTGGGACTTATTTATTAACTATGGGATTGCACAGTGCTTTGCCTTTCTTGTTTGTACTAAGTGGCACAATCCAACTATTCATGGAGGCTGTCATATCACAGAACCATGTTCATCATCAAATACCATAAGATACCTAGACATGAGTAGAGGAGGCTTAGTTATTTATACAGATGAAGATAGGCAGCAAAATGGGTTCTGCAATCTGCAGGATATTGGTGGGCATATCATGAAAATTCCATTCATTGGTTTTCAAATACTTCTTTTTATGCATTTAGAGGGAACACCATCCAGTGCAAAAAATCTGCGACATTGGGTCATTTTTTCACCCCTTTTTATGTTGCAAGGAGCTGGGGTTTTATTTGCTGCATATAGATTAATAGAGAAGATAGTTCTTTTACTCTACAGTGGAGATATTCCTGAAAGATACTCAGCTATAGCATCAAAATCTCGTGAGTGCTTCGGGTTCTTTCGACATGGGTCAAGGTTACTTGGTTGGTGGTCAATAGATGAAGGAAGTAAAGAGGAAGAAGCTAGACTTTTTTTTTCTGGGAGTTCTGGGTATAATACTTTTACCCCTGATACAGTGAAGAAAATGCCTAGAGCAGATCTGGTTGAGGAGATTTGGAGACTACAAGCTGCACTGGGTGAGCAGACAGAAGTTACAAAATTTAGCCAAGAGGAGTATGAAAGGCTTCAACACGAGAAGATCTTATGTAGAATTTGCTTCGAAGAGCAGATTAACGTGGTCCTCCTTCCTTGTAGGCATCACATTATTTGCAGCACTTGCTGCGAAAAATGTAAAAGGTGCCCTGTCTGCCGTGGCACCATTGAAGAAAGGATGCCTGTATATGATGTGTAG 1092 0.4066 MMNLRIVFMPLVFFEMVVLFDNIRMCRALMPGDDENLTDEAVWETLPHFWISISMVFLIAATVFTLLKICGDVAALGWWDLFINYGIAQCFAFLVCTKWHNPTIHGGCHITEPCSSSNTIRYLDMSRGGLVIYTDEDRQQNGFCNLQDIGGHIMKIPFIGFQILLFMHLEGTPSSAKNLRHWVIFSPLFMLQGAGVLFAAYRLIEKIVLLLYSGDIPERYSAIASKSRECFGFFRHGSRLLGWWSIDEGSKEEEARLFFSGSSGYNTFTPDTVKKMPRADLVEEIWRLQAALGEQTEVTKFSQEEYERLQHEKILCRICFEEQINVVLLPCRHHIICSTCCEKCKRCPVCRGTIEERMPVYDV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01561 363 ProSiteProfiles Zinc finger RING-type profile. 316 351 IPR001841 -
Phac7g01561 363 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 2 363 - -
Phac7g01561 363 Pfam Zinc finger, C3HC4 type (RING finger) 314 356 - -
Phac7g01561 363 SUPERFAMILY RING/U-box 306 359 - -
Phac7g01561 363 Pfam Transmembrane Fragile-X-F protein 2 190 IPR019396 -
Phac7g01561 363 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 291 362 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01561 Phac-Chr7 11737621 11746745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01561 2 363 C3H Transcription Factor Family AT1G73950 62.740 1.34e-168 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01561 - - gmx:113000756 714.531