Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01533 ATGACTGAAGAAAGTGCTGGAAACACAGTTGCAGCCTCTATTACCCCATTAAACTGGTGGTATCTCCAGGCAAACTCTATTTCTTCCTGGAACGATACTAATAACACATGGAACAACCAACGAAACCCTAATTCCTCCTCTTCTTGTGAGGAGGATATATCTGTTTCTACATCCTTCACTAATGCTTCCAACCATTCAAGCCTCACTGTTGAGTCCTCTCGCAGACTCATTGACCCACCTGCTCCTTCCTCCAACGAGTTGATGGGAGAACATGCTTCAGATAACCAACTTTGGAGCCATGTTCTATCAGGTGTTGGATCAAACGGCGAGTTACATAGCAGCCAAGAAATTGGAGAGAACTTTCTGGGTGCACTGTCATCAAAAAGCATGACAAGCACTATGTTTCAGCCAGTCTGTGACTACTTGAAGAAACTTGATCATACCAGTTGGGAATATAGTGGTTCAACTTCATTAAACAGCTTTGAGAAGCACTTAAACGGGTTTAGTGAGGCGATGATTGAGAATAATGAAAGCTTAACCAAGTTATCTAATCTTGTAAGCACTTGTTCTATTGCCCCACCAGACCCAGAAGTAAATAGCCACTTTGATCCACAAACAAACAACATATCCTTGAATTCTTCCATGGATAATTTCCCACAATCTGATCACTTCAAGCAACCTTTTGGAGACTCCACATGCTCTCTTGGAGGAGTAGCTAATAGAAATTCTGGAGTGTTCCCATGCTATGATCATGACATGAAGATCAAGCAAGAGTTTCATGCAGGTGAAGTGCAAGGATCTGTATATGGAAAATCATTAAATGCAAATGGATATCAACATGGATTTAATGGCCTTTCAGTAGGTGATAGTTGCAAACTCTACCATGGGATGCCCAATCTTCCTTCATGCACAAGAAATTTCTCAGATGTTATATCCTTTAATAGTCGATTTGGAAGGCCAGTTATTGGAATCCATGCTCAGAAGCCAAGCATGAAGTTCCTGAACGTATCTGAACCAAAGAAGCAGGGTCTTCAAACACCATCACCGATAAGAACTAATATTAATGGAAAAGGGGAGGGTACAACACGTGAAGTAAAGAAGAAAAGATCTGAAGAATCTTCAGATGCAATGTTAAAAAAGCCTAAGCAAGATACATCAACAGCTTCTTCTTCAAAGGCACCCAAAGTCAAGCTAGGGGACAAAATCACAGCCCTTCAACAAATTGTGTCTCCATTTGGAAAGACAGATACTGCATCTGTGCTGTTTGAAGCAATAGGATACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTGAGCAACCCTTACTTGAAGGCAAACTCTCACAAGGATCCATGGGGAAGCTTGGATAGAAAAGATAAGGATGATACAAAGCTAGATCTTCGGAGCAGAGGTCTTTGTTTAGTTCCTACTTCATGTACTCCTCTAGTTTACAGAGAGAGCAGTGGACCAGATTACTGGACACCAGCATACAGAGGATGTTTGTATAGGTGA 1512 0.4127 MTEESAGNTVAASITPLNWWYLQANSISSWNDTNNTWNNQRNPNSSSSCEEDISVSTSFTNASNHSSLTVESSRRLIDPPAPSSNELMGEHASDNQLWSHVLSGVGSNGELHSSQEIGENFLGALSSKSMTSTMFQPVCDYLKKLDHTSWEYSGSTSLNSFEKHLNGFSEAMIENNESLTKLSNLVSTCSIAPPDPEVNSHFDPQTNNISLNSSMDNFPQSDHFKQPFGDSTCSLGGVANRNSGVFPCYDHDMKIKQEFHAGEVQGSVYGKSLNANGYQHGFNGLSVGDSCKLYHGMPNLPSCTRNFSDVISFNSRFGRPVIGIHAQKPSMKFLNVSEPKKQGLQTPSPIRTNINGKGEGTTREVKKKRSEESSDAMLKKPKQDTSTASSSKAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKANSHKDPWGSLDRKDKDDTKLDLRSRGLCLVPTSCTPLVYRESSGPDYWTPAYRGCLYR* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01533 503 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 130 481 - -
Phac7g01533 503 MobiDBLite consensus disorder prediction 339 359 - -
Phac7g01533 503 CDD bHLH_AtbHLH_like 390 439 IPR045239 -
Phac7g01533 503 MobiDBLite consensus disorder prediction 338 394 - -
Phac7g01533 503 MobiDBLite consensus disorder prediction 360 379 - -
Phac7g01533 503 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 397 447 IPR036638 GO:0046983
Phac7g01533 503 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 382 431 IPR011598 GO:0046983
Phac7g01533 503 Gene3D - 392 450 IPR036638 GO:0046983
Phac7g01533 503 MobiDBLite consensus disorder prediction 64 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01533 Phac-Chr7 11137015 11140364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01533 23 503 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 34.940 3.96e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01533 - - gmx:100527800 866.685