Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01532 ATGAAAAGAAAGGGAGGTCATGAGAACCAAGATGCTGTGAACAGAGGTGCTTGGTCTGCTGAGGAAGACCAAATCCTTGTTAACTACGTTCACCTCCATGGAGAAGGAAAATGGGGGCAGATTTCCAGAAGAACTGGTTTAAAACGAGGGGGGAAGAGTTGCAGACTTCGATGGTTGAATTATCTAAAGCCAGATATAAAGAGAGGAAACATTTCTTCGGATGAAGAAGATCTCATTATCAGGCTACATAGCCTCTTAGGGAATAGATGGTCTCTTATTGCGGGACGGTTGCCTGGGCGTACAGACAATGAAATCAAGAACTACTGGAATACTTATTTGAGAAAGAAAGTAGAGGAGAAACACAATGATAACAACAATATGGAATTAAGAATTGAATCTCCACAGTGCACAAATATTGATCCTACCAAATCTTCTCAACCAGTAAGGTGTAATGAGGCTATGATTCCAACTGTAGCACTCAATGATTCAGTCAACACAAAGGGTTTAACTTCAACAAGTTGGACTGAAAACCCATTTGAATCTACCCCACCTGATCATCATGATGGCTGCTCAGAAGGTTTCCCCACACACTTTGATATAAGTGACCTGTTGATGCCCCAGGAGGATTGTCATTTCAATGGATATGCTTGTGTTGAATTACCCCAACAGTTTGGAGATGAATCATGCGGCGTTAATGATGCGATATGTGAAACATGGTATGATAATTGGAAGAATGAAGACTATTTTCCACTAGATGATGTGGATTTTCCTTTATTTTAA 780 0.4038 MKRKGGHENQDAVNRGAWSAEEDQILVNYVHLHGEGKWGQISRRTGLKRGGKSCRLRWLNYLKPDIKRGNISSDEEDLIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKKVEEKHNDNNNMELRIESPQCTNIDPTKSSQPVRCNEAMIPTVALNDSVNTKGLTSTSWTENPFESTPPDHHDGCSEGFPTHFDISDLLMPQEDCHFNGYACVELPQQFGDESCGVNDAICETWYDNWKNEDYFPLDDVDFPLF* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01532 259 FunFam Transcription factor TT2 71 139 - -
Phac7g01532 259 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Phac7g01532 259 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Phac7g01532 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Phac7g01532 259 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Phac7g01532 259 Gene3D - 72 138 - -
Phac7g01532 259 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Phac7g01532 259 CDD SANT 72 113 IPR001005 -
Phac7g01532 259 FunFam Myb transcription factor 15 67 - -
Phac7g01532 259 SMART sant 67 115 IPR001005 -
Phac7g01532 259 SMART sant 14 64 IPR001005 -
Phac7g01532 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Phac7g01532 259 CDD SANT 17 62 IPR001005 -
Phac7g01532 259 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 10 159 - -
Phac7g01532 259 Gene3D - 7 68 - -
Phac7g01532 259 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01532 Phac-Chr7 11102912 11104480 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01532 8 116 MYB Transcription Factor Family AT5G52600 72.477 1.13e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac7g01532 Myb_DNA-binding 1.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01532 K09422 - gmx:547459 373.244