Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01529 ATGGAAAGAAAGGCCAATTGTGAGAATGAATATGCTATGAACAGAGGTCCTTGGTCTGCTGAAGAAGACAAAATTCTTATGAACTACGTTCAAGTCCATGGAGAAGGTAAATGGAGAGAGCTTTCCAAAAGAGCAGGCTTGAAAAGATGTGGCAAGAGTTGCAGACTTCGATGGCTGAATTATCTAAAGCCAGATATAAAGAGAGGAAACATTTCTTGTGATGAAGAAGATCTCATTATCAGATTACACAAACTCTTAGGGAATAGATGGTCTCTAATTGCGGGACGATTACCAGGGAGAACAGACAATGAAATTAAGAACTACTGGAATACTTATTTGAGAAAGAAGGTAGAGCAGAAGTACAATCAAAACGATGTTGTTGGCCATGACAGCAACATTCCTATCAACTTAAGCTCCAAAAATTTCTTGGGTGATGTTCTTGATCCTACAAAACCCCCTCACCCAATGATGATTAAACCCAAATCAATGAGGTGTACCAAGGTTATGATGCCAGGCAATGATTCAGTCAGCACAATGAATTTGATCACAACGACCAGGGACCATAATAACCCTTCTGCATCCATGTCACAAGATCACCATAACCACTGTTTAGCAGGTGTTTTTCAAGACTTTGATATCAGTGACTTGTTAATGTCGTACGAGGATGATTGTCGTTTCAACGGGTATGCTTGTGTTGAAATACCAGAACGTACTTTTGAAGATGAGACTTGGAGGCTTGATGATTCAATGGTTGGAGAAGTGTGGTACGAGAATTGGAAGCATGACAGTTACTTTTCACAAGAACAAGATACGGTCATGGGTTTTTCATCCTTTTAA 837 0.3967 MERKANCENEYAMNRGPWSAEEDKILMNYVQVHGEGKWRELSKRAGLKRCGKSCRLRWLNYLKPDIKRGNISCDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKKVEQKYNQNDVVGHDSNIPINLSSKNFLGDVLDPTKPPHPMMIKPKSMRCTKVMMPGNDSVSTMNLITTTRDHNNPSASMSQDHHNHCLAGVFQDFDISDLLMSYEDDCRFNGYACVEIPERTFEDETWRLDDSMVGEVWYENWKHDSYFSQEQDTVMGFSSF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01529 278 FunFam Transcription factor TT2 71 138 - -
Phac7g01529 278 CDD SANT 74 113 IPR001005 -
Phac7g01529 278 Gene3D - 72 132 - -
Phac7g01529 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Phac7g01529 278 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Phac7g01529 278 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Phac7g01529 278 FunFam MYB-related transcription factor 14 67 - -
Phac7g01529 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 62 IPR017930 -
Phac7g01529 278 Gene3D - 15 67 - -
Phac7g01529 278 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Phac7g01529 278 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Phac7g01529 278 SMART sant 14 64 IPR001005 -
Phac7g01529 278 SMART sant 67 115 IPR001005 -
Phac7g01529 278 CDD SANT 17 62 IPR001005 -
Phac7g01529 278 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Phac7g01529 278 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01529 Phac-Chr7 11044906 11046347 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01529 2 117 MYB Transcription Factor Family AT3G13540 68.103 1.87e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac7g01529 Myb_DNA-binding 9.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01529 K09422 - gmx:100794570 446.817