Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01527 ATGGCGGCAGCTTCCTCATCCACTCCATTCTCGGGAATCAGAGAAGAAAGCCCTCAGATTACAACGCACCATCAACCCTCCACAGTTGCTCCAATCACAGTTCCTCAAAAGAAACGGAGGAATCAACCTGGAACCCCAAATCCAGACGCGGAGGTGATAAAACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTTATATGTGAGGTGTGCAATAAAGGATTTCAAAGGGAGCAAAACCTACAGCTCCACAGAAGAGGACACAACCTTCCTTGGAAGCTAAAGCAGAAGAGTACAAAAGAGCAAAAAAGAAAGGTTTATCTTTGTCCCGAGCCCACCTGCGTCCATCATGATCCTTCAAGGGCTTTGGGAGACCTCACTGGAATCAAGAAGCACTACTCTCGCAAGCATGGTGAGAAGAAGTGGAAGTGTGAAAAGTGCTCAAAGAAATATGCTGTTCAATCTGATTGGAAAGCACATTCAAAGACTTGTGGCACTAGAGAGTACAGATGTGACTGTGGCACTCTCTTCTCTAGGCGTGACAGTTTCATCACTCATAGGGCGTTCTGTGATGCATTAGCACATGAGAGTGCAAGATACCCCAGTAGCTCAAACCCTTTGGGAACTCATTTGTTTGGCACAAACCACACTAGTTTAACCCTATCCCAAGTGGGTACCCAACTTTCCCAAGTTCAAAATCAGAACCAAACAGTCACTAACATTGGTGCAGCTCTAAAGTTTGAGCACTTGATTCCACCTCTAAATCAGTCTTCATTTGGACACTCACCACAATCAATGCCTTCCTCAGCTTTCTTCATGAATAACAACACCAATCAAACATTATTTGAAGAACACCAATCACAACAAGGACAAATATTCTCAAACAAACAACTACATGGCCTAATGCAGCTCACTGCTCTTGATGGCAACACTAACAACTCCAATTCTTCATCAGTTGCTGCTCCTAATTCCAATCTCTTCAACCTCAGCTTCTTCCCAAGTAGCAATAGCACTAGCACCATTATCCCTGATCAATTCAACAACATAAGTGGTAGTGACCAAGGAACAACACCACCACCACTCTTTGTTAATAACAACCCTGCAGTAAGTGATCATGTGGGTTCAAGTTTTTCTTCGCTCTTTGGTGATTCAATAGAAAACGTATCATCCCCTCATATGTCTGCCACTGTGTTGCTTCAAAAAGCCTCTCAAATGGGTTCAACCACAACCACCAGCGGTTCTTCTTTACTTAGAGGAATGTCTAGCAATGGTTCCAAAGCTGAAAATGGTCACCACCACCACCACAATCTTCAAGGGTTGATGAACTCTATTGCCAATGGAAACACGTCCTTGTTTAGGAATATGCAAGGGAATGAAAACAACCTTTCTGGGTTTCACAACGTCGACGAGTCCAACCATAAGTTGCCCCAGAATCTTAATGTAAACTTTGGAGGTTCTGATAAGTTGACCTTAGACTTTTTGGGTGTTGGAGGAATGGTTAGAAATATGAATGGTGGATTCTCACAGAGAGAACAACTACAACAACAACGTGTCATGGGTACTGAATTCTTTGGACCCTGA 1581 0.4345 MAAASSSTPFSGIREESPQITTHHQPSTVAPITVPQKKRRNQPGTPNPDAEVIKLSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEQKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESARYPSSSNPLGTHLFGTNHTSLTLSQVGTQLSQVQNQNQTVTNIGAALKFEHLIPPLNQSSFGHSPQSMPSSAFFMNNNTNQTLFEEHQSQQGQIFSNKQLHGLMQLTALDGNTNNSNSSSVAAPNSNLFNLSFFPSSNSTSTIIPDQFNNISGSDQGTTPPPLFVNNNPAVSDHVGSSFSSLFGDSIENVSSPHMSATVLLQKASQMGSTTTTSGSSLLRGMSSNGSKAENGHHHHHNLQGLMNSIANGNTSLFRNMQGNENNLSGFHNVDESNHKLPQNLNVNFGGSDKLTLDFLGVGGMVRNMNGGFSQREQLQQQRVMGTEFFGP* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01527 526 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Phac7g01527 526 FunFam protein indeterminate-domain 5, chloroplastic-like 120 199 - -
Phac7g01527 526 Gene3D Classic Zinc Finger 120 198 - -
Phac7g01527 526 Gene3D Classic Zinc Finger 47 116 - -
Phac7g01527 526 MobiDBLite consensus disorder prediction 405 434 - -
Phac7g01527 526 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 9 511 IPR031140 -
Phac7g01527 526 MobiDBLite consensus disorder prediction 1 51 - -
Phac7g01527 526 Pfam Zinc-finger double-stranded RNA-binding 66 88 IPR022755 -
Phac7g01527 526 MobiDBLite consensus disorder prediction 405 426 - -
Phac7g01527 526 MobiDBLite consensus disorder prediction 1 43 - -
Phac7g01527 526 SMART c2h2final6 107 137 IPR013087 -
Phac7g01527 526 SMART c2h2final6 142 162 IPR013087 -
Phac7g01527 526 SMART c2h2final6 66 88 IPR013087 -
Phac7g01527 526 SUPERFAMILY beta-beta-alpha zinc fingers 65 162 IPR036236 -
Phac7g01527 526 FunFam protein indeterminate-domain 12-like 45 113 - -
Phac7g01527 526 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 88 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01527 Phac-Chr7 11024457 11028793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01527 61 504 C2H2 Transcription Factor Family AT2G02080 47.390 5.11e-120 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g01527 zf-C2H2_jaz 3.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01527 K25870 - gmx:100780268 786.178