Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01494 ATGGAAATGCAGTGGTCAATTGTAGATGATGGTTGTATCATTGATTTGATGGATTTGGGTCACTGCAGCAACACCAACAATGACATCTACACTGAATTTTCAAGATCAACAGAAGATGGTGGTGTTTATATCTTTGATTCTATGAACTTGGATCTCAACAACAACATTCAGAACAATGGCAGTAGAACTTTAAGATCAACCCAAGATGGTGTTTTCATCTTTGATTCCATGCAAAACAACCACAATTCTGTTCAAAATCTTGAAAGGTTCAAAATTGAAGAAAAAATGGAAGAATCTTGTTGCATCTGTCTTGGGGAATTTTCAATTGGATCAAGAGCAATTCGCATGCCCCAACCATGTTCTCATATCTTTCATCAACATTGCATCACAAAATGGCTCAACATCAGTCAGACATGTCCTTTATGTCGCAGGAACATCTAG 441 0.3719 MEMQWSIVDDGCIIDLMDLGHCSNTNNDIYTEFSRSTEDGGVYIFDSMNLDLNNNIQNNGSRTLRSTQDGVFIFDSMQNNHNSVQNLERFKIEEKMEESCCICLGEFSIGSRAIRMPQPCSHIFHQHCITKWLNISQTCPLCRRNI* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01494 146 PANTHER SI:CH211-59O9.10 84 146 - -
Phac7g01494 146 SMART ringv_2 99 143 IPR011016 GO:0008270
Phac7g01494 146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 146 IPR013083 -
Phac7g01494 146 Pfam Ring finger domain 99 143 IPR001841 -
Phac7g01494 146 SUPERFAMILY RING/U-box 84 146 - -
Phac7g01494 146 ProSiteProfiles Zinc finger RING-type profile. 100 143 IPR001841 -
Phac7g01494 146 SMART ring_2 100 142 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01494 Phac-Chr7 10628595 10629035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01494 81 143 C3H Transcription Factor Family AT1G14200 43.939 3.59e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01494 - K22753 pvu:PHAVU_007G097900g 195.282