Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01479 ATGGGTAGTGTTGAAATTCCCAATTGGCTGAAAGGGTTGCCACTGGCCCCGGAATTTCGCCCTACCGACACTGAATTTGCTGACCCAATTGCTTACATTTCAAAGATTGAGAAGGAAGCTTCCGGCTTCGGGATTTGTAAGATTATCCCACCATTGCCCAAACCCTCAAAAAAATATGTTTTTTCTAATTTGAATAGGTCACTCTTGAAGTGCCCGGATTTGGGTACAGATAACAGTTCACTAGGTGTTTGTAATTCATTAAAAACCAGTTCTGGGGATGGTAGTAATGATGGGGTGTCTCGAGCCGTGTTTACTACAAGGCATCAAGAACTAGGGCAGAGTCAGAGTGTGAAAAAAGCCAAAGGAACGGTTCAGAATCCACTGTCAGGTGTTCATAAGCAAGTATGGCAAAGTGGGGAGGTTTATACTCTGGAACAGTTTGAGTCTAAATCGAAGTCCTTTGCAAGAAGCTTGCTAGGGTCGGTGAAGGATGTTTCTCCGCTGGTTATAGAGTCTATGTTTTGGAAGGCAACTTTAGAAAAGCCAATATATGTGGAGTATGCCAATGACGTGCCTGGGTCTGCTTTTGAAGAGTCAAAGGGTCAATTTCATTATAGTCATAGAAGGCTAAGAAAAAGGACTTATTATAAGAGTAGGCTAGATAGCTCTGATTGTAAACAAACTGTAATGGGTTGCGGAAGAGATACCCAAACTGATGAGACTAAGGGTGCTTCTGTCCAAAGTGATGCTGACACATGTTTACGGATGACCAAATCAGTTGCTACTGGGTCAACATTTTCATCGAATGAAGATTCACAATCTTTTAAGGAAAAGAGTACAGATACCGGCAATGATATGCAAGGCACTGCTGGTTGGAAGCTTTCGAACAGTCCTTGGAACCTGCAAGTTATTGCACGATCATCTGGCTCACTTACACGTTTTATGCCGGATGATATTCCTGGTGTCACTTCACCTATGGTGTACATTGGTATGCTGTTCAGTTGGTTTGCTTGGCATGTAGAGGATCATGAGCTTCACAGCTTGAATTTTCTTCACACTGGCTCATCAAAGACTTGGTATGCTGTTCCTGGAGATTATGCCTTTGCTTTTGAGGAAGTCATCCGTACTGAGGGTTATGGTGGTGATATTGATCACTTAGCCGCATTGAAACTTTTGGGTGAAAAAACAACTCTTTTGTCACCTGAGGTAATTGTTGCATCTGGAATTCCTTGTTGCAGGTTAACACAGAACCCTGGCGAATTTGTTGTGACTTTTCCAAGAGCTTATCATGTAGGATTCAGCCATGGTTTTAACTGTGGGGAAGCTGCTAACTTTGGAACTCCACAATGGCTTAGCGTAGCCAAGGAAGCTGCAGTGCGCAGAGCTGCAATGAACTATCTTCCCATGCTTTCCCATCAGCAACTACTTTACTTACTGACCATGTCTTTTATTTCAAGAGTTCCAAGAACACTATTACCTGGGGTGCGTAGTTCTCGTTTGAGAGACCGTCAGAAAGAAGAAAGGGAGTTTTCAGTAAAACAGGCTTTCATTGAAGACATGCTACAGGAAAACAAGCTGCTATCTATTCTTCTTGGAAAGGAAGCTTCTAAAAGAGCTGTTTTATGGAATGCTGATTTGCTGCCAGATTCCAGCAAAGATTTTCAGTTGCCCGATTTAACTTCTACAACTGGAACCTCTTTGGCCAACATACCAAATATTAGCTCTGCTGAAAAGAATAGTCATTATCTGCTTGATGATGAGATGAGTTTGTATTTGGATTGTTTGACTAATATAGATATTGGTGGTGATGATCTTCCCTATCACTTCCAAACTGATTCTGGAGCACTGGCTTGTGTGGGTTGTGGAATCCTTGGTTTTCCATTTATGGCTGTGATACAACCAACTGAGAAATTGACAATGGAACTTCTTCCTGATAATCATCTAATTCAAGTTTCCTCTCCGGACTCTACTACTGGTCCTCATAGTTCCATATCAAGGGATCTTTCAGTTTCTGAACTTTCATCAGTAAAGGAGATGCCAGATCACTCATTAAATAAGTGTAGTAAATGCTGGAACACCTCCAGTAAATTTTTCAGGCCTCGGATTTTCTGCCTGGGGCATGCTGTTCAAATAGTAGAGATGTTGCAGAGCAAAGGTGGAGCCAATGTGCTTATAATTTGCCATTCAGACTATCAGAAAATAAAGGCACATGCCAAGGAAGTTGCGGAAGAGATACATGGTGCTTTTAATTATAATGAGATTGCATTAGATACCGCATCCCCAGAAAATTTGACCCTGATAGATCTGGCAGTTGATGGTGAAGAGCTTGATCAATGTGAAGACTGGACATCAACACTAGGCATTAACCTACGGAATTGGGTCCATGCAAGAAATAATGCTCCATCTAAACAAGTTCCTTGGACACTAGAGACATTGTTCTATGATAATTGTCCTGCTTCAAATGTTTTAGCTTTGAATTGGCTGTCTCGGAGGTCTCGGTCAAAAAGGTCGTGTCATTTAGCTCAGACTAAATCCTCTTACAGCATTGAGAGAAAAAAGGATGATCGGTTGGGTGGAAGAATAAATGACTCCATTGCTGAAAAGAAGCTAATTCAGTATTCAAGAAGGAAGTTCAAGTCAAAGCAAAGGAGTTTCCCTGTAGCAAACATGGTATGTGAATTCCAAGAGAAGTCCAAAAATGTGTCAGCTACCTTAAGTGCGGATCATAATAATTGTGTTTCTAAAACTCTTGAAGCTGAGAATTTAAGTACCGAGTGTGCATTGCCATGTGCTTCTGCTTCTACTGAAATGTCTGCAATGCATCCTGAAATCCAGATTGCTGAAATACCAATTAGCACGAAAATGAATGCTGCTAAGTCACAACCTTCAAATTCCATTCCTGATCATATTTTAATGATTGAAGAAGTTGGAGCTGAGATTGAGAACCAAACCATGCAAGAATCACATGTAGACAGAAATAATGATTTAACACTCAGTCACTCTAAGATGCACTGCAATACCAGTGTCTCAGAAATATGTGGCAAGGAGAGCCAAGATTGTCAGGACAAGAAATGTTCTAGTGCATTTTCAAATGCAACAGATGGAAATATTGAAATGATTAGAAAGACTGAAATTGAAGAAGCAGTTATGATTGATAGCAACTGTAATAGGTTAATATTGGATGATGAAGGGCATCAAGAATATCAGTCTACCTACAAAAACAACAAGGAGGAAGCTGCTTTATCAACTGCTTCAATGGTAAATCAATCTACACTTGCATCTATGGATGGAAATGTTGAAAGTCCAAATAATAATTATATCTCAGAAAGAGTTAGGAATCCAATTTTCCTAGAAAGGACAACTGAAGAAGAAATTGATTCTATATGTGAAACGAACAAGGAACCTCGAATTGATGGCGGGCCAATTAGTGCACATACTCCAAATGAAGTTTGTGAAGTTGGAAGGGAGTTTTATGCTTCTGCAGACCTGCATAATAACGGAATCTTGGATGGTGAGATGCAACAGGTAACTCAGGGTGGAAAAAATAGCAAAAGGGAAATAAGTCAGTCTACTCATGTTTCAGCAAAACAACGGTGTCTATCGTCTGAGCAGTGTGGGATTGAAAATATGAACAAAATTAACGAGGAACCTGTTTCTAGTTATGCTGCAAAAGTTGAAAATAAAAGCCTAACTTCAATAGAGTTAGGATGTTCTGAAGTTTCAGTGGAAACCTGTCCTAACAAAGACTCCTGTATTCAATTTATTCCTGATAAAGAAAAAAAAATAGAAATCCAGTCAGTTAATACATCCATAAAGGACTCTTCTCTATCAATGCAGGAAGGCTCAAAAATTGGGAAAGAGATTTATGTTGCAGATAACATAAATGAAATCAAAGCTGATTTGTCCCAAGATAAAAGAGGGCTGGAAAGCTGTGAGTTGGCTACAGAAGTTCCCAGATTAAATGCTGGGAAGAAAAAAAAGAGGAAAGTGGAACGAACAAGGAGGAACGAATCTAATTCTGACAACTTTATTAGAAGTCCATGCGAGGGGTTGAGGCCAAGAGCTGGGAAGATCGCTGGAAAAAGTAGAGTAGAAATCAACCAAGTTGACAAGGAAAATCAGGTGGCTAAACGGGCAAGGAGATCTTCTGAAGTTTTGGTTCCTTGCAAAAATAAAAAAGATGGTGTTAAAAAGTCCCACAAGTGCGACCTCGATGGTTGCAGAATGAGTTTCAAGACCAAGGCAGAGTTACTGTTGCATAAACGAAACCTTTGCCCGTATGAAGGGTGTGGTAAGAAGTTCAGTTCCCACAAATATGCTTTACTTCACCAGCGTGTTCATGATGACGAGAGGCCCCTTAAGTGCCCATGGAAAGGTTGTTCCATGTCGTTCAAGTGGGCTTGGGCAAGGACAGAGCACATACGCGTACATACTGGGGAGAAGCCTTATCACTGCAAGGTGGAGGGGTGCGGCCTTTCCTTCAGGTTTGTATCAGACTTTAGCAGACACAGACGGAAAACAGGACACCATGTGAAACCTCCTGCTTGA 4548 0.4081 MGSVEIPNWLKGLPLAPEFRPTDTEFADPIAYISKIEKEASGFGICKIIPPLPKPSKKYVFSNLNRSLLKCPDLGTDNSSLGVCNSLKTSSGDGSNDGVSRAVFTTRHQELGQSQSVKKAKGTVQNPLSGVHKQVWQSGEVYTLEQFESKSKSFARSLLGSVKDVSPLVIESMFWKATLEKPIYVEYANDVPGSAFEESKGQFHYSHRRLRKRTYYKSRLDSSDCKQTVMGCGRDTQTDETKGASVQSDADTCLRMTKSVATGSTFSSNEDSQSFKEKSTDTGNDMQGTAGWKLSNSPWNLQVIARSSGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSLNFLHTGSSKTWYAVPGDYAFAFEEVIRTEGYGGDIDHLAALKLLGEKTTLLSPEVIVASGIPCCRLTQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLSVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRTLLPGVRSSRLRDRQKEEREFSVKQAFIEDMLQENKLLSILLGKEASKRAVLWNADLLPDSSKDFQLPDLTSTTGTSLANIPNISSAEKNSHYLLDDEMSLYLDCLTNIDIGGDDLPYHFQTDSGALACVGCGILGFPFMAVIQPTEKLTMELLPDNHLIQVSSPDSTTGPHSSISRDLSVSELSSVKEMPDHSLNKCSKCWNTSSKFFRPRIFCLGHAVQIVEMLQSKGGANVLIICHSDYQKIKAHAKEVAEEIHGAFNYNEIALDTASPENLTLIDLAVDGEELDQCEDWTSTLGINLRNWVHARNNAPSKQVPWTLETLFYDNCPASNVLALNWLSRRSRSKRSCHLAQTKSSYSIERKKDDRLGGRINDSIAEKKLIQYSRRKFKSKQRSFPVANMVCEFQEKSKNVSATLSADHNNCVSKTLEAENLSTECALPCASASTEMSAMHPEIQIAEIPISTKMNAAKSQPSNSIPDHILMIEEVGAEIENQTMQESHVDRNNDLTLSHSKMHCNTSVSEICGKESQDCQDKKCSSAFSNATDGNIEMIRKTEIEEAVMIDSNCNRLILDDEGHQEYQSTYKNNKEEAALSTASMVNQSTLASMDGNVESPNNNYISERVRNPIFLERTTEEEIDSICETNKEPRIDGGPISAHTPNEVCEVGREFYASADLHNNGILDGEMQQVTQGGKNSKREISQSTHVSAKQRCLSSEQCGIENMNKINEEPVSSYAAKVENKSLTSIELGCSEVSVETCPNKDSCIQFIPDKEKKIEIQSVNTSIKDSSLSMQEGSKIGKEIYVADNINEIKADLSQDKRGLESCELATEVPRLNAGKKKKRKVERTRRNESNSDNFIRSPCEGLRPRAGKIAGKSRVEINQVDKENQVAKRARRSSEVLVPCKNKKDGVKKSHKCDLDGCRMSFKTKAELLLHKRNLCPYEGCGKKFSSHKYALLHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGEKPYHCKVEGCGLSFRFVSDFSRHRRKTGHHVKPPA* 1516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01479 1515 ProSiteProfiles Zinc finger C2H2 type domain profile. 1423 1452 IPR013087 -
Phac7g01479 1515 Pfam JmjC domain, hydroxylase 326 445 IPR003347 -
Phac7g01479 1515 ProSiteProfiles Zinc finger C2H2 type domain profile. 1483 1514 IPR013087 -
Phac7g01479 1515 Pfam jmjN domain 17 50 IPR003349 -
Phac7g01479 1515 Gene3D Classic Zinc Finger 1421 1509 - -
Phac7g01479 1515 MobiDBLite consensus disorder prediction 263 290 - -
Phac7g01479 1515 SUPERFAMILY beta-beta-alpha zinc fingers 1424 1460 IPR036236 -
Phac7g01479 1515 SMART cupin_9 293 462 IPR003347 -
Phac7g01479 1515 Gene3D Cupin 9 466 - -
Phac7g01479 1515 SMART JmjN_1 15 55 IPR003349 -
Phac7g01479 1515 SUPERFAMILY Clavaminate synthase-like 294 460 - -
Phac7g01479 1515 ProSitePatterns Zinc finger C2H2 type domain signature. 1455 1477 IPR013087 -
Phac7g01479 1515 FunFam Probable lysine-specific demethylase ELF6 1450 1479 - -
Phac7g01479 1515 ProSitePatterns Zinc finger C2H2 type domain signature. 1485 1509 IPR013087 -
Phac7g01479 1515 ProSitePatterns Zinc finger C2H2 type domain signature. 1425 1447 IPR013087 -
Phac7g01479 1515 PANTHER LYSINE-SPECIFIC DEMETHYLASE 8 1449 - -
Phac7g01479 1515 ProSiteProfiles Zinc finger C2H2 type domain profile. 1453 1482 IPR013087 -
Phac7g01479 1515 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Phac7g01479 1515 MobiDBLite consensus disorder prediction 1322 1346 - -
Phac7g01479 1515 ProSiteProfiles JmjC domain profile. 293 462 IPR003347 -
Phac7g01479 1515 SMART c2h2final6 1400 1422 IPR013087 -
Phac7g01479 1515 SMART c2h2final6 1423 1447 IPR013087 -
Phac7g01479 1515 SMART c2h2final6 1483 1509 IPR013087 -
Phac7g01479 1515 SMART c2h2final6 1453 1477 IPR013087 -
Phac7g01479 1515 SUPERFAMILY beta-beta-alpha zinc fingers 1463 1513 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01479 Phac-Chr7 10411569 10424471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01479 1 904 C2H2 Transcription Factor Family AT5G04240 54.898 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g01479 JmjC 9.5e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01479 - - gmx:100799861 2516.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g01479 7 10411569 10424471 Phac7g01479 7 10411569 10424471 ECH