Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01472 ATGCTGACATCTTTGACAATGATACAAAATCTTGCCAAACTACAAATCCATGGACCTAATAGAGAAGTTCTGAATGCTAGAGAATCCTCTCAATTAGATGGAATTGATGATATTTTCTTTGAGCTGCAACCTAAAGATTGTTTGACATTAGTAAATGGTACTTTAGTGGGATTTGACTTAGCTTCCATGCACCACCATGGCCAAATTGAGGTTGCGACCATAATGGAGCATATATTGGATGAAAGTTCATTTGTTAAGGCAACACAAAGGTTTCATGAAATTGACCCACTTCAAAAGCTTAAACAAGATAAGCACGCAACAAAGATGATTGAAAGGGATATCAACTCTGTAAATGATAACCCCTTCATTGGTGTTTCAAGGAATAAGGCACTTCATTGTGGTAATTTTCAAGGAGTGAACTCGTTAGGCTTAATTTCTTCAAGAAAGACAAGAGAAACATTAGACATTTTAAAACTCGAGTATTCCACATTTTTAGGTGCATTATGTCAAGCTATTAATCTAAGTCATTTAGAGGAAAACTTGAAGAACACTATCAAGAATATTGTGAGTCTAGTGGCAAAAAAAAAATTATCACAGTTGATATTAATCACGAGTCACACCATTTTGGATTGTAGGAGGACTTGCTTAAAGTTATGGATAGTGAGTATGTTTTTGTTTACATTGACGACCCTTGTGCTATTCTTTGATGCAAAAGTTGAGGTTAGTCATAATTGA 735 0.3483 MLTSLTMIQNLAKLQIHGPNREVLNARESSQLDGIDDIFFELQPKDCLTLVNGTLVGFDLASMHHHGQIEVATIMEHILDESSFVKATQRFHEIDPLQKLKQDKHATKMIERDINSVNDNPFIGVSRNKALHCGNFQGVNSLGLISSRKTRETLDILKLEYSTFLGALCQAINLSHLEENLKNTIKNIVSLVAKKKLSQLILITSHTILDCRRTCLKLWIVSMFLFTLTTLVLFFDAKVEVSHN* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01472 244 SUPERFAMILY L-aspartase-like 17 197 IPR008948 GO:0003824
Phac7g01472 244 Coils Coil 174 194 - -
Phac7g01472 244 Gene3D Fumarase/aspartase (Central domain) 139 223 - -
Phac7g01472 244 Pfam Aromatic amino acid lyase 64 138 IPR001106 -
Phac7g01472 244 Gene3D Fumarase/aspartase (Central domain) 59 138 - -
Phac7g01472 244 PANTHER HISTIDINE AMMONIA-LYASE 64 138 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01472 Phac-Chr7 10230572 10231676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01472 137 218 Monolignol Biosynthesis Gene Families AT2G37040 57.317 5.00e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01472 K10775 - gmx:100801470 150.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g01472 7 10230572 10231676 Phac7g01472 7 10230572 10231676 ECH