Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01398 ATGTCCGGTAACTCCAATTGCAGTGTTTACATAGGCAATCTAGATGAGAGGGTGACAGACAGGGTCTTGTATGATATATTAATTCAAGCAGGACGAGTGGTAGATTTGCACATTCCTAAAGATAAGGAATCTGAGAAACCGAAAGGTTTTGCCTTTGCTGAATATGAATCTGAGGAGATTGCAGACTATGCTGTCCGACTTTTCTCGGGCCTTGTTACTCTCTACAACAGAACACTCAAGTTTGCGATATCTGGAAGAGACAAAACTACCCTTAATGGCTCTACAGCAAATACCCCCACATCAAATTCTTCTCAAAGGCCAAGGTCGTATGCAGTCCCAATTAATAATTCAGAAAATTTTCAGCACCCAGCTAGGCTATCAACTTCTGATCGATATTCAGATTATGCAGTAAATTATTCCCAAGTTCCTCCTATTCGTGTAACTGACCAACCTAGTGGGAATGGATCTCACTATAGTGGCAACAATTATGAATACAGCAGGAGAGCTTTTGGGGCAACATTGGATAGCATTAGCCGTAATAGGTTCCGCCGCTTTGATAAAAGTAGCCCAATCTCTTACCCATCTCACTAA 591 0.4162 MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYESEEIADYAVRLFSGLVTLYNRTLKFAISGRDKTTLNGSTANTPTSNSSQRPRSYAVPINNSENFQHPARLSTSDRYSDYAVNYSQVPPIRVTDQPSGNGSHYSGNNYEYSRRAFGATLDSISRNRFRRFDKSSPISYPSH* 197
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01398 196 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 86 IPR000504 GO:0003723
Phac7g01398 196 Gene3D - 2 95 IPR012677 -
Phac7g01398 196 MobiDBLite consensus disorder prediction 88 126 - -
Phac7g01398 196 SUPERFAMILY RNA-binding domain, RBD 4 80 IPR035979 GO:0003676
Phac7g01398 196 MobiDBLite consensus disorder prediction 143 162 - -
Phac7g01398 196 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 80 IPR000504 GO:0003723
Phac7g01398 196 SMART rrm1_1 8 82 IPR000504 GO:0003723
Phac7g01398 196 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 1 193 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01398 8 102 Eukaryotic Initiation Factors Gene Family AT1G49760 27.368 8.15e-07 47.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01398 K12831 - gmx:100803118 351.288