Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01394 ATGGAAGATTCAGAGGAGGATGAGCTTTTGAATCTTAGCCTTTCAGTTGCTGCGGATAGGGAAAAGAAAAAGAAGGGAAAGATAATTAGGGAACATAGCGTCTCTATGAGTAGTACTACTGCTAGGAACTCCTATGAAAGCTATGAAGGGAAGATATTTAGGCTTCTTGAAATGAGGGAGCAGATGGTAAGAGAAGAGCATAGGAGGAAAGGAGTTGTGGAAGATGGGAATGGCCTCCCCTTGATCCATTTGCTGCTCTCAACTGCCACTGCTGTTGATGACAACAACTTGGATTCATCCTTAGAGAATCTCACTGATTTATACCAAACTGTTTCCCTAACAGGTGACTCGGTTCAGCGTGTGGTGGCTTATTTTGCTGATGGTTTGGCCGCAAGGCTTCTCACAAGGAAATCTCCATTCTACGACGTGCTCATGGAGGACCCAACAACTGAGGAAGAGTTCCTTGCATTCACGGATCTCTACAGGGTTTCACCTTACTTCCAATTCGCTCATTTCACAGCAAACCAAGCTATTTTGGAGGCCTTTGAGAGAGAGGAAGAGAGGAACAACCGCGCTTTGCATGTCATTGACTTTGATGTCTCCTATGGCTTCCAATGGCCCTCTCTCATTCAGTCTCTCTCAGAGAAGGCAACCACTGGCAACCGCATATCCCTCAGGATAACCGGATTTGGGAAGAATCTCAAAGAGCTTCAAGAAACTGAGTCTAGATTGGTTAGTTTCTCAAAGGGTTTTGGCAGTCTGGTGTTTGAATTCCAAGGGCTGCTACGAGGCTCAAGGGTGATCAACCTAAGGAAGAAAAAAAATGAAACGGTGGCTGTCAACTTAGTTTCTTATTTGAACACTTTGAGTTGTTTCATGAAGATCTCTGACACATTGGGATTTGTTCATTCCCTTCATCCCTCCATTGTTGTTCTGGTGGAGCAAGAGGGTAGCAGGAGTCCTAGGAGCTTCTTGTCAAGGTTCACAGACTCCTTGCACTACTTTGCAGCCATGTTTGATTCACTGGATGATTGCCTCCCACTAGATAGTGCTGAGAGGTTCAGAATTGAGAAGAAGCTTCTGGGGAAAGAAATCAAAAGCTTGCTCAACAATGATGTGGATGGTGTGGATTGCCCAAAATATGAGAGGATGGAAACATGGAAAGCAAGAATGGAGAATCATGGGTTTGTTGCCACCAAAATAAGCTCAAAGTCTATGATCCAAGCAAAACTGTTGCTGAAGATGAGGACACATTATTGTCCTCTTCAGTTTGAGGAAGAAGGAGGTGGAGGTTTCAGGGTTTCTGAAAGAGATGAAGGAAGGGCTATCTCTTTAGGGTGGCAAAATAGGTTTCTGTTGACAGTCTCAGCATGGCAATCAGTCTGA 1386 0.4452 MEDSEEDELLNLSLSVAADREKKKKGKIIREHSVSMSSTTARNSYESYEGKIFRLLEMREQMVREEHRRKGVVEDGNGLPLIHLLLSTATAVDDNNLDSSLENLTDLYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFYDVLMEDPTTEEEFLAFTDLYRVSPYFQFAHFTANQAILEAFEREEERNNRALHVIDFDVSYGFQWPSLIQSLSEKATTGNRISLRITGFGKNLKELQETESRLVSFSKGFGSLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFMKISDTLGFVHSLHPSIVVLVEQEGSRSPRSFLSRFTDSLHYFAAMFDSLDDCLPLDSAERFRIEKKLLGKEIKSLLNNDVDGVDCPKYERMETWKARMENHGFVATKISSKSMIQAKLLLKMRTHYCPLQFEEEGGGGFRVSERDEGRAISLGWQNRFLLTVSAWQSV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01394 461 Pfam GRAS domain family 81 459 IPR005202 -
Phac7g01394 461 ProSiteProfiles GRAS family profile. 72 459 IPR005202 -
Phac7g01394 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 66 454 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01394 Phac-Chr7 9394197 9396103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01394 77 459 GRAS Transcription Factor Family AT1G14920 34.336 1.61e-54 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac7g01394 GRAS 2.1e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01394 - - gmx:100809458 815.068