Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01387 ATGAGTTCCTACAGTGCAAGTGGTGATGTAGTTGTGACAACCTCTCCCAAAGAAGGAGAGGATGAGGCTGTCATTTATGCTTTGTTACTTTGCACTAGTCAGGTGTTTCCTTCAATGCTCAATGCTGCTATTGAGCTTAACTTGTTTGAGATCATAGCAAAGGCAACACCACCAAATGCAGCCATGTCAGCCTCAGAAATTGCTTCTAAGTTACCAACCCAACAACTAGATAGGCTCAAGCGCATGCTGCGTTTGCTTGCTAACTATTCTCTGCTCACTTGTTCCACTCACACCAATGAAGATGGTAGCATTGAGAGAACTTATGGACTCTCGTCTGTTGGAAAATACTTTGTCAATGATGAAACTAGGGGTTCTTTGGGTTCCTTCATAGCACTTTGCCAACATCCTACAGTGCTAAAACTTTGGCCGAATTTTAAGGATGTAATAACTGATTCTGAGGACGACCTATGCAAGAAGGTTCATGGAATGTCTTTCTACCAATGCACTGAAAGAGATCCGCAGCTGAGTTACATTTTCAACGATTCAATGGCTAATCTTTGCAACATAGAAATGAATAGGATTCTTGAAGTGTATAAAGGATTTGAAGGAGTGTCAAATCTGGTTGATGTGGGAGGTTGTACAGGGCAAACTCTCCACATGATAATCTCCAAGTACTCTACAATTAAGGGTATTAACTTTGATTTGCCCCAAGTCGTTGAAAAAGCGCCATCTTACCCAGGGATACAGCATGTTGGAGGAGATATGTACCATTGTGTACCAAAGGGTGATGCCATGATTCTAAAGGCTGTGTTGCACAATTGGTCAGATGAACACTGCTTAAGCATTTTGAGGAACTGTCACAATGCACTGCCACAGAATGGAAAGGTGATTGTGATAGAATTTGTAGCACCAGAAGAAGCTTCAGAGTCATATGTATCAAAGCTTCTTTCCAACTTCGACAGCCTCATGTATATGACAAGTGGTGGGAAGGAAAGAAGTGAAAAGGAGTACGAGAAATTGTGCAAGCTTTCTGGATTCTCAAGATTTCAAGTTGTCTGTCGTGCGTTTTCTGCCTTAGGAACCATGGAATTTCACAAATAA 1101 0.416 MSSYSASGDVVVTTSPKEGEDEAVIYALLLCTSQVFPSMLNAAIELNLFEIIAKATPPNAAMSASEIASKLPTQQLDRLKRMLRLLANYSLLTCSTHTNEDGSIERTYGLSSVGKYFVNDETRGSLGSFIALCQHPTVLKLWPNFKDVITDSEDDLCKKVHGMSFYQCTERDPQLSYIFNDSMANLCNIEMNRILEVYKGFEGVSNLVDVGGCTGQTLHMIISKYSTIKGINFDLPQVVEKAPSYPGIQHVGGDMYHCVPKGDAMILKAVLHNWSDEHCLSILRNCHNALPQNGKVIVIEFVAPEEASESYVSKLLSNFDSLMYMTSGGKERSEKEYEKLCKLSGFSRFQVVCRAFSALGTMEFHK* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01387 366 PANTHER O-METHYLTRANSFERASE 30 349 IPR016461 GO:0008168
Phac7g01387 366 Gene3D Vaccinia Virus protein VP39 118 366 IPR029063 -
Phac7g01387 366 Gene3D - 6 117 IPR036388 -
Phac7g01387 366 Pfam Dimerisation domain 39 87 IPR012967 GO:0046983
Phac7g01387 366 FunFam Caffeic acid 3-O-methyltransferase 7 117 - -
Phac7g01387 366 Pfam O-methyltransferase domain 142 347 IPR001077 GO:0008171
Phac7g01387 366 SUPERFAMILY "Winged helix" DNA-binding domain 20 121 IPR036390 -
Phac7g01387 366 PIRSF O-mtase 6 366 IPR016461 GO:0008168
Phac7g01387 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 366 IPR016461 GO:0008168
Phac7g01387 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 354 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01387 Phac-Chr7 9343514 9345494 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01387 20 356 Monolignol Biosynthesis Gene Families AT5G54160 47.214 9.51e-109 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01387 - - gmx:100798347 446.432