Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01380 ATGGAATCATGCGTGCCTCCAGGGTTTAGATTTCATCCAACGGAAGAGGAGCTTGTGGGCTACTATCTCAAGAGGAAGATAAACTCCCTGAAAATCGATCTTGATGTTATTGTTGAGATTGATCTATACAAAATGGAACCATGGGACATACAAGATAGGTGCAAGCTAGGATATGAGCAACAAAATGAATGGTACTTTTTCAGCCATAAAGATAAGAAGTATCCTACAGGAACAAGAACTAACAGGGCCACTGCTGCTGGATTCTGGAAAGCAACTGGAAGGGACAAGGCTGTCATGTCCAAAAATAGAATCATAGGGATGAGGAAGACCTTGGTCTTCTACAAGGGACGTGCCCCTAATGGAAGGAAAACAGACTGGATTATGCATGAATATAGGCATCAAACCTCTGAACATGGTCCTCCACAGGAAGAAGGATGGGTTGTGTGCCGAGCATTTCGGAAGCCTAGTCCAAGTCACAGGCAAGGTTATGAGGCATGGTGCAGTAGTAGTAGCCATCAACAGTTTTTCAAAGATCAAAGCTTTGCAAGACCCTTATCAATTGCTGATATTTTGAATGAAACAAATGTGCCTCATCATCATCACCCTGCTGAAGCTCCAAGTTTTAGTCTTCCTTTTGGCTCAGATCAGCAACACTTTATTCTACCAAACCAAACTGTTATGGACAAACAGCTGATTGAGCTTCCTCAGCTAGATAGTCCAACTGCAAGTTTTGCAATGAAGGAATGTAACCAACAACACCACAATGGCCTCACAAATGAGGAATATTGTAGTGATGAAAGGAGCAATAGCAGTGCGCAAGGTATCGATTGGAAGAGTTTGGACAACTTGTTCGGGTCACAGTTGAGTGACACAGCTTATTTTTCACATCCAAACGTGGCCTTGATGATGCCCCATAATAACCATGATCAAGCTAGTCATATCCTAGGATGCTTCCCTGATTCATAG 966 0.4286 MESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQEEGWVVCRAFRKPSPSHRQGYEAWCSSSSHQQFFKDQSFARPLSIADILNETNVPHHHHPAEAPSFSLPFGSDQQHFILPNQTVMDKQLIELPQLDSPTASFAMKECNQQHHNGLTNEEYCSDERSNSSAQGIDWKSLDNLFGSQLSDTAYFSHPNVALMMPHNNHDQASHILGCFPDS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01380 321 FunFam NAC domain-containing protein 14 158 - -
Phac7g01380 321 ProSiteProfiles NAC domain profile. 5 154 IPR003441 GO:0003677|GO:0006355
Phac7g01380 321 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 247 - -
Phac7g01380 321 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
Phac7g01380 321 SUPERFAMILY NAC domain 3 154 IPR036093 GO:0003677|GO:0006355
Phac7g01380 321 Gene3D NAC domain 14 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01380 Phac-Chr7 9285620 9289811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01380 1 321 NAC Transcription Factor Family AT1G71930 54.734 7.42e-116 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac7g01380 NAM 7.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01380 - - var:108325420 648.277