Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01379 ATGACATTAACCCAAATTCCTGAGAGATCATCAGTTGATATGGAATCATGCGTGCCTCCAGGGTTTAGATTTCATCCAACGGAAGAGGAGCTTGTGGGCTACTATCTCAAGAGGAAGATAAACTCCCTGAAAATCGATCTTGATGTTATTGTTGAGATTGATCTATACAAAATGGAACCATGGGACATACAAGATAGGTGCAAGCTAGGATATGAGCAACAAAATGAATGGTACTTTTTCAGCCATAAAGATAAGAAGTATCCTACAGGAACAAGAACTAACAGGGCCACTGCTGCTGGATTCTGGAAAGCAACTGGAAGGGACAAGGCTGTCATGTCCAAAAATAGAATCATAGGGATGAGGAAGACCTTGGTCTTCTACAAGGGACGTGCCCCTAATGGAAGGAAAACAGACTGGATTATGCATGAATATAGGCATCAAACCTCTGAACATGGTCCTCCACAGGAAGAAGGATGGGTTGTGTGCCGAGCATTTCGGAAGCCTAGTCCAAGTCACAGGCAAGGTTATGAGGCATGGTGCAGTAGTAGTAGCCATCAACAGTTTTTCAAAGATCAAAGCTTTGCAAGACCCTTATCAATTGCTGATATTTTGAATGAAACAAATGTGCCTCATCATCATCACCCTGCTGAAGCTCCAAGTTTTAGTCTTCCTTTTGGCTCAGATCAGCAACACTTTATTCTACCAAACCAAACTGTTATGGACAAACAGCTGATTGAGCTTCCTCAGCTAGATAGTCCAACTGCAAGTTTTGCAATGAAGGAATGTAACCAACAACACCACAATGGCCTCACAAATGAGGAATATTGTAGTGATGAAAGGAGCAATAGCAGTGCGCAAGGTATCGATTGGAAGAGTTTGGACAACTTGTTCGGGTCACAGTTGAGTGACACAGCTTATTTTTCACATCCAAACGTGGCCTTGATGATGCCCCATAATAACCATGATCAAGCTAGTCATATCCTAGGATGCTTCCCTGATTCATAG 1005 0.4259 MTLTQIPERSSVDMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQEEGWVVCRAFRKPSPSHRQGYEAWCSSSSHQQFFKDQSFARPLSIADILNETNVPHHHHPAEAPSFSLPFGSDQQHFILPNQTVMDKQLIELPQLDSPTASFAMKECNQQHHNGLTNEEYCSDERSNSSAQGIDWKSLDNLFGSQLSDTAYFSHPNVALMMPHNNHDQASHILGCFPDS* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01379 334 ProSiteProfiles NAC domain profile. 18 167 IPR003441 GO:0003677|GO:0006355
Phac7g01379 334 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Phac7g01379 334 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 260 - -
Phac7g01379 334 SUPERFAMILY NAC domain 14 167 IPR036093 GO:0003677|GO:0006355
Phac7g01379 334 FunFam NAC domain-containing protein 27 171 - -
Phac7g01379 334 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01379 Phac-Chr7 9285620 9290534 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01379 14 334 NAC Transcription Factor Family AT1G71930 54.734 9.29e-116 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac7g01379 NAM 8.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01379 - - var:108325420 659.448