Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01376 ATGGTGATCGTGGGAAAAGAGTTGGTACTAGGAGTATGTACGAAGGAGTGTTGGAGATTGTCGGAGAGTGGCAAAATGTCGAAAGATTGGAGCGCATCAAAGTGCAAAAACGTGTTGCCGCACGAGACCCCGGACCTGAAGGAGCACTACGTTGTGGGGCAGAAGGTGCTGGGAAAAGGGCACTTGGCCACCACCTACCTCTGCACCCACAAGGAGACAAGGAAGAGTTACGCCTGCAAAACCATCCCAAAGGCCAAGCTGTTGTGCCAAGAGGAGTGTGATGATGTGTGGAGGGAGATTCAGATCATGCACCATTTGTCGGAGCACCCCAACGTGGCAAGGATACAGGGAATCTATGAGGACAAGTTTGCGGTGCACCTTGTGATGGAGCTGTGTCGTGGGGGTGAGCTTTTCTATAGGATCACTCAGAAGGGGCATTACAGCGAACGTGAGGCTGCCAAGTTGATGAAGACCATTGTTGGGGTGGTGGAAGGGTGCCACGCTCTTGGGGTCATCCATAGGGATCTCAAGCCTGAGAATTTCTTGTTTGATACCCCTGCCAGTAAGGCCACCCTCAAGGTCATCGATTTTGGCTTCTCTGTCTTCTTTAAACCAGGACAAACCTTTAGTGATATAGTAGGAACTTGCTACTATATGGCCCCAGAGGTGTTGCACAGACAATCTGGACCAGAAGTGGACGTTTGGAGTGCTGGTGTTATTCTGTACATCTTACTGAGAGGGCTCCCACCTTTCTGGGCAAAATCCGAATCAGGAGTCTACAAACAGATTTTGCATGAAGAGGTTGATTTTGCATCTGATCCGTGGCCAAGTATATCAGGAAGTGCTAAAGATTTGATAAAACAGATGTTGGATAAAGACCCAAAGAAAAGAATTTCTGCTCATGAAGTCTTGTGTCACCCTTGGATTGTTGATGATAGTGTTGCCCCTGACAAACCTCTGGATCCTGCTGTTTTGACACGCCTAAAGCATTTCTCAACAATGAATAAACTGAAGAAGATGGCATTACGTGTCATAGTAGAAAGACTTTCAGAAGAGGAAATAGGTGGATTAAAAGAGTTATTTAGAATGATTGACGAAGACAATAGTGGGACAATCACTTTTCAGGAACTCAAAGATGGTTTGAAAAGTGTGGGATGTGATCTCATGGAATCTGAAATTAAATCCCTTATGGAGGCGGCTGATATAGACAGCAATGGGACAATAGACTATGGTGAATTTCTCGCAGCTACACTACACTTGAATAAGATGGAAAGAGAAGAAAATTTGGTTGCTGCTTTTTCCTATTTTGATAGAGATGGTAGTGGTTATATAACCATTGATGAGCTTCAACAGGCTTGTAACGACTTCGGTCTTGGTGTTTTGCATCTGGATGAGATGATCAAAGAGATTGATCAAGACAATGATGGGAGAATTAATTATGGGGAGTTTGCAACAATGATGAGAAGGGGCGAACCAGGTAGAAACAGAACCATGAACAGCAATGTTAACACTTCATTATTGCACGAGTTAGGACTGAAAGACTCATCCTAA 1551 0.4481 MVIVGKELVLGVCTKECWRLSESGKMSKDWSASKCKNVLPHETPDLKEHYVVGQKVLGKGHLATTYLCTHKETRKSYACKTIPKAKLLCQEECDDVWREIQIMHHLSEHPNVARIQGIYEDKFAVHLVMELCRGGELFYRITQKGHYSEREAAKLMKTIVGVVEGCHALGVIHRDLKPENFLFDTPASKATLKVIDFGFSVFFKPGQTFSDIVGTCYYMAPEVLHRQSGPEVDVWSAGVILYILLRGLPPFWAKSESGVYKQILHEEVDFASDPWPSISGSAKDLIKQMLDKDPKKRISAHEVLCHPWIVDDSVAPDKPLDPAVLTRLKHFSTMNKLKKMALRVIVERLSEEEIGGLKELFRMIDEDNSGTITFQELKDGLKSVGCDLMESEIKSLMEAADIDSNGTIDYGEFLAATLHLNKMEREENLVAAFSYFDRDGSGYITIDELQQACNDFGLGVLHLDEMIKEIDQDNDGRINYGEFATMMRRGEPGRNRTMNSNVNTSLLHELGLKDSS* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01376 516 ProSitePatterns EF-hand calcium-binding domain. 365 377 IPR018247 -
Phac7g01376 516 ProSiteProfiles EF-hand calcium-binding domain profile. 388 423 IPR002048 GO:0005509
Phac7g01376 516 SMART serkin_6 51 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01376 516 PANTHER SERINE/THREONINE-PROTEIN KINASE 43 483 - -
Phac7g01376 516 Gene3D Transferase(Phosphotransferase) domain 1 137 316 - -
Phac7g01376 516 SMART efh_1 462 490 IPR002048 GO:0005509
Phac7g01376 516 SMART efh_1 428 456 IPR002048 GO:0005509
Phac7g01376 516 SMART efh_1 356 384 IPR002048 GO:0005509
Phac7g01376 516 SMART efh_1 392 420 IPR002048 GO:0005509
Phac7g01376 516 FunFam Calcium-dependent protein kinase 5 137 317 - -
Phac7g01376 516 CDD EFh 429 488 IPR002048 GO:0005509
Phac7g01376 516 Pfam Protein kinase domain 54 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01376 516 ProSitePatterns EF-hand calcium-binding domain. 437 449 IPR018247 -
Phac7g01376 516 SUPERFAMILY EF-hand 348 488 IPR011992 -
Phac7g01376 516 FunFam Calcium-dependent protein kinase 1 317 491 - -
Phac7g01376 516 CDD STKc_CAMK 49 308 - -
Phac7g01376 516 ProSiteProfiles EF-hand calcium-binding domain profile. 424 459 IPR002048 GO:0005509
Phac7g01376 516 ProSiteProfiles EF-hand calcium-binding domain profile. 352 387 IPR002048 GO:0005509
Phac7g01376 516 ProSitePatterns EF-hand calcium-binding domain. 471 483 IPR018247 -
Phac7g01376 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Phac7g01376 516 Gene3D - 317 490 - -
Phac7g01376 516 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
Phac7g01376 516 CDD EFh 357 416 IPR002048 GO:0005509
Phac7g01376 516 FunFam Calcium-dependent protein kinase 1 53 136 - -
Phac7g01376 516 Pfam EF-hand domain pair 357 417 IPR002048 GO:0005509
Phac7g01376 516 Pfam EF-hand domain pair 427 488 IPR002048 GO:0005509
Phac7g01376 516 SUPERFAMILY Protein kinase-like (PK-like) 33 334 IPR011009 -
Phac7g01376 516 ProSiteProfiles Protein kinase domain profile. 51 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01376 516 Gene3D Phosphorylase Kinase; domain 1 52 136 - -
Phac7g01376 516 ProSiteProfiles EF-hand calcium-binding domain profile. 462 493 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01376 Phac-Chr7 9257007 9266143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01376 26 516 EF-hand Containing Proteins AT4G09570 69.715 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac7g01376 Pkinase 2.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01376 K13412 - gmx:100811596 848.195