Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01374 ATGGTGATCGTGGGAAAAGAGTTGGTACTAGGAGTATGTACGAAGGAGTGTTGGAGATTGTCGGAGAGTGGCAAAATGTCGAAAGATTGGAGCGCATCAAAGTGCAAAAACGTGTTGCCGCACGAGACCCCGGACCTGAAGGAGCACTACGTTGTGGGGCAGAAGGTGCTGGGAAAAGGGCACTTGGCCACCACCTACCTCTGCACCCACAAGGAGACAAGGAAGAGTTACGCCTGCAAAACCATCCCAAAGGCCAAGCTGTTGTGCCAAGAGGAGTGTGATGATGTGTGGAGGGAGATTCAGATCATGCACCATTTGTCGGAGCACCCCAACGTGGCAAGGATACAGGGAATCTATGAGGACAAGTTTGCGGTGCACCTTGTGATGGAGCTGTGTCGTGGGGGTGAGCTTTTCTATAGGATCACTCAGAAGGGGCATTACAGCGAACGTGAGGCTGCCAAGTTGATGAAGACCATTGTTGGGGTGGTGGAAGGGTGCCACGCTCTTGGGGTCATCCATAGGGATCTCAAGCCTGAGAATTTCTTGTTTGATACCCCTGCCAGTAAGGCCACCCTCAAGGTCATCGATTTTGGCTTCTCTGTCTTCTTTAAACCAGGACAAACCTTTAGTGATATAGTAGGAACTTGCTACTATATGGCCCCAGAGGTGTTGCACAGACAATCTGGACCAGAAGTGGACGTTTGGAGTGCTGGTGTTATTCTGTACATCTTACTGAGAGGGCTCCCACCTTTCTGGGCAAAATCCGAATCAGGAGTCTACAAACAGATTTTGCATGAAGAGGTTGATTTTGCATCTGATCCGTGGCCAAGTATATCAGGAAGTGCTAAAGATTTGATAAAACAGATGTTGGATAAAGACCCAAAGAAAAGAATTTCTGCTCATGAAGTCTTGTGTCACCCTTGGATTGTTGATGATAGTGTTGCCCCTGACAAACCTCTGGATCCTGCTGTTTTGACACGCCTAAAGCATTTCTCAACAATGAATAAACTGAAGAAGATGGCATTACGTGCTGATATAGACAGCAATGGGACAATAGACTATGGTGAATTTCTCGCAGCTACACTACACTTGAATAAGATGGAAAGAGAAGAAAATTTGGTTGCTGCTTTTTCCTATTTTGATAGAGATGGTAGTGGTTATATAACCATTGATGAGCTTCAACAGGCTTGTAACGACTTCGGTCTTGGTGTTTTGCATCTGGATGAGATGATCAAAGAGATTGATCAAGACAATGATGGGAGAATTAATTATGGGGAGTTTGCAACAATGATGAGAAGGGGCGAACCAGGTAGAAACAGAACCATGAACAGCAATGTTAACACTTCATTATTGCACGAGTTAGGACTGAAAGACTCATCCTAA 1383 0.4577 MVIVGKELVLGVCTKECWRLSESGKMSKDWSASKCKNVLPHETPDLKEHYVVGQKVLGKGHLATTYLCTHKETRKSYACKTIPKAKLLCQEECDDVWREIQIMHHLSEHPNVARIQGIYEDKFAVHLVMELCRGGELFYRITQKGHYSEREAAKLMKTIVGVVEGCHALGVIHRDLKPENFLFDTPASKATLKVIDFGFSVFFKPGQTFSDIVGTCYYMAPEVLHRQSGPEVDVWSAGVILYILLRGLPPFWAKSESGVYKQILHEEVDFASDPWPSISGSAKDLIKQMLDKDPKKRISAHEVLCHPWIVDDSVAPDKPLDPAVLTRLKHFSTMNKLKKMALRADIDSNGTIDYGEFLAATLHLNKMEREENLVAAFSYFDRDGSGYITIDELQQACNDFGLGVLHLDEMIKEIDQDNDGRINYGEFATMMRRGEPGRNRTMNSNVNTSLLHELGLKDSS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01374 460 Gene3D - 363 431 - -
Phac7g01374 460 SMART serkin_6 51 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01374 460 Gene3D Transferase(Phosphotransferase) domain 1 138 347 - -
Phac7g01374 460 FunFam Calcium-dependent protein kinase 1 53 136 - -
Phac7g01374 460 Gene3D Phosphorylase Kinase; domain 1 52 137 - -
Phac7g01374 460 ProSitePatterns EF-hand calcium-binding domain. 415 427 IPR018247 -
Phac7g01374 460 ProSiteProfiles EF-hand calcium-binding domain profile. 368 403 IPR002048 GO:0005509
Phac7g01374 460 Gene3D - 348 362 - -
Phac7g01374 460 FunFam Calmodulin A 310 434 - -
Phac7g01374 460 FunFam Calcium-dependent protein kinase 5 137 317 - -
Phac7g01374 460 ProSiteProfiles EF-hand calcium-binding domain profile. 332 367 IPR002048 GO:0005509
Phac7g01374 460 ProSitePatterns EF-hand calcium-binding domain. 345 357 IPR018247 -
Phac7g01374 460 Pfam Protein kinase domain 54 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01374 460 CDD STKc_CAMK 49 308 - -
Phac7g01374 460 ProSiteProfiles EF-hand calcium-binding domain profile. 406 437 IPR002048 GO:0005509
Phac7g01374 460 PANTHER SERINE/THREONINE-PROTEIN KINASE 43 427 - -
Phac7g01374 460 SUPERFAMILY Protein kinase-like (PK-like) 33 334 IPR011009 -
Phac7g01374 460 Pfam EF-hand domain pair 371 432 IPR002048 GO:0005509
Phac7g01374 460 ProSitePatterns EF-hand calcium-binding domain. 381 393 IPR018247 -
Phac7g01374 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Phac7g01374 460 CDD EFh 345 396 IPR002048 GO:0005509
Phac7g01374 460 CDD EFh 373 432 IPR002048 GO:0005509
Phac7g01374 460 SUPERFAMILY EF-hand 288 435 IPR011992 -
Phac7g01374 460 ProSiteProfiles Protein kinase domain profile. 51 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01374 460 SMART efh_1 336 364 IPR002048 GO:0005509
Phac7g01374 460 SMART efh_1 406 434 IPR002048 GO:0005509
Phac7g01374 460 SMART efh_1 372 400 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01374 Phac-Chr7 9257007 9266143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01374 26 460 EF-hand Containing Proteins AT4G09570 59.756 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac7g01374 Pkinase 1.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01374 K13412 - gmx:100811596 600.897