Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01351 ATGGACGGCAACCCCATCACCACTTCCTCCTCCGCATCACCTCCCGTGAATTTCAATTTCTCCCCCGATAACCCCTCCCCACTCTCCCTCACTGCGGATCAGGTCAGCCACTGCGCCGAAGCCCTCAACCTTTTGAAGGAAAAACTCCACGCTCCTCACACCATCACTCGGGAGTTCGCACACTTGCAGGCAAACAGAATAACGCCGAGTGAGATGAGGAGAAGATGCACCGTTGCTCTTGACGCTGTCAATTTGAGCAAAAACCGATACACGGACGTTTTGCCATTTGACAGTAACAGGGTTGTTCTCAAATCGAGTGCAGATTATAGACCTGCAGCACAGGGGTATATCAATGCAAGCTTGGTCTCGACCTCCTCCCCTGGAAACGTGTCACAGTTTGTAGCCACCCAAGGTCCACTTCCACATACTTATGAAGATTTCTGGGAGATGATTATCCAATATCACTGCCCTGCAATTATCATGCTTACAAGGTTGGTGGATAATTATAAGATGGTAAAGTGTGGAGATTATTTTCAAGCGGAGGACGGACCTAGAGAAGTTGGTAATATTTCTGTTATCGGTAAATGGGTGAACACTACCGAAACTTCATTGGTGCTGCGCCTTTTAGAGGTGAACCATAGAGAGGTAGAAGATGCTCCAATATCTGTTTTGCATATTCAGTATCCTGAATGGCCTGACCACGGAGTTCCGAAAGATACATTAGCTGTGCGTGAAATTTTGAAAAGATTATACCATTTACCACCAAACCTTGGTCCAATAGTGGTTCACTGCAGGTTCATCTCATTTCTTCTTTTTCTGTGTTTATTCACTTTATGA 837 0.4588 MDGNPITTSSSASPPVNFNFSPDNPSPLSLTADQVSHCAEALNLLKEKLHAPHTITREFAHLQANRITPSEMRRRCTVALDAVNLSKNRYTDVLPFDSNRVVLKSSADYRPAAQGYINASLVSTSSPGNVSQFVATQGPLPHTYEDFWEMIIQYHCPAIIMLTRLVDNYKMVKCGDYFQAEDGPREVGNISVIGKWVNTTETSLVLRLLEVNHREVEDAPISVLHIQYPEWPDHGVPKDTLAVREILKRLYHLPPNLGPIVVHCRFISFLLFLCLFTL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01351 278 Pfam Protein-tyrosine phosphatase 84 265 IPR000242 GO:0004725|GO:0006470
Phac7g01351 278 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 41 265 IPR029021 -
Phac7g01351 278 ProSiteProfiles PTP type protein phosphatase domain profile. 55 264 IPR000242 GO:0004725|GO:0006470
Phac7g01351 278 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 48 264 - -
Phac7g01351 278 PRINTS Protein tyrosine phosphatase signature 115 122 IPR000242 GO:0004725|GO:0006470
Phac7g01351 278 PRINTS Protein tyrosine phosphatase signature 133 153 IPR000242 GO:0004725|GO:0006470
Phac7g01351 278 PRINTS Protein tyrosine phosphatase signature 221 238 IPR000242 GO:0004725|GO:0006470
Phac7g01351 278 SMART PTPc_3 54 275 IPR000242 GO:0004725|GO:0006470
Phac7g01351 278 Gene3D Protein tyrosine phosphatase superfamily 29 266 IPR029021 -
Phac7g01351 278 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01351 Phac-Chr7 9043821 9046485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01351 33 264 Protein tyrosine phosphatase (PTP) family AT1G71860 65.517 3.68e-118 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01351 - - gmx:548044 477.248