Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01291 ATGCCGGAATCGGAGACAGGAACGCCGACGGCGGCTTCGGTGCCGGCCACGCCAGACACTCCGGGAGGACCGCTGTTCACGTCGCTGCGAGTGGACTCGCTGTCGCACGAGCGTGACTCGTTCACCATGAATCGATGCAACAAGTGTTTACCGACCAAAGATCAGAACTGCTTCACTGATTTCTCTCTCGGTGTTTCCCTGCCCAATGTTTCTCTCACTCAAAAGGTTGGAGCAGAGTTTGTGGGGACATTCATACTGATATTCGCAGCAACGGCTGGGCCGATAGTGAACAACAAGTACAATGGAGTGGAGACTCTGATGGGAAATGCAGCATGTGCAGGGTTAACAGTGATGTTCATCATCCTCTCCATTGGACACATCTCAGGTGCACATCTGAACCCATCACTCACCATTGCCTTCGCAGCCTTTCGGCACTTCCCTTGGACCCATGTCCCTGCCTACATAGCAGCTCAAGTCTCTGCCTCCATCTGTGCCTGTTTTGCTCTCAAAGGTGTTTACCACCCTTTCCTCTCCGGTGGGGTCACTGTCCCTTCTGTCAGCGTTGGCCAGGCCTTTGCAACTGAGTTTATCATCACTTTCAATCTCTTGTTTGTTGTCACTGCTGTTGCCACTGACACTCGTGCGGTCGGTGAAATGGCGGGTATTGCTGTTGGGGCTACAGTTTTGCTCAACATTCTCATATCAGGGCCAACAAGTGGTGGTTCCATGAATCCAGTGCGCACGTTAGGGCCAGCCGTTGCAGCAGGAAATTACAAGCATATATGGATCTATTTGGTGGCTCCCACGCTGGGTGCACTCGCCGGTGCCGGCGTTTACACGCTGGTCAAGCTGCGTGACAATGAGGCTGAACCACCGCGACAAGTTAGGAGTTTCCGTCGCTAG 903 0.5338 MPESETGTPTAASVPATPDTPGGPLFTSLRVDSLSHERDSFTMNRCNKCLPTKDQNCFTDFSLGVSLPNVSLTQKVGAEFVGTFILIFAATAGPIVNNKYNGVETLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWTHVPAYIAAQVSASICACFALKGVYHPFLSGGVTVPSVSVGQAFATEFIITFNLLFVVTAVATDTRAVGEMAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHIWIYLVAPTLGALAGAGVYTLVKLRDNEAEPPRQVRSFRR* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01291 300 Pfam Major intrinsic protein 69 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01291 300 MobiDBLite consensus disorder prediction 1 15 - -
Phac7g01291 300 FunFam Aquaporin NIP2-1 63 294 - -
Phac7g01291 300 Gene3D Glycerol uptake facilitator protein. 62 295 IPR023271 -
Phac7g01291 300 PRINTS Major intrinsic protein family signature 150 169 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01291 300 PRINTS Major intrinsic protein family signature 262 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01291 300 PRINTS Major intrinsic protein family signature 113 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01291 300 PRINTS Major intrinsic protein family signature 194 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01291 300 PRINTS Major intrinsic protein family signature 74 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01291 300 PRINTS Major intrinsic protein family signature 225 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01291 300 CDD MIP 74 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g01291 300 PANTHER AQUAPORIN NIP2-1 42 288 IPR034294 -
Phac7g01291 300 SUPERFAMILY Aquaporin-like 70 292 IPR023271 -
Phac7g01291 300 ProSitePatterns MIP family signature. 131 139 IPR022357 -
Phac7g01291 300 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01291 Phac-Chr7 8558306 8563722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01291 25 300 Major Intrinsic Protein MIP AT4G10380 74.823 7.74e-148 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01291 K09874 - gmx:100804356 556.214