Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01288 ATGTCTGTTCAGAAGGACCCAGATAAGTTCTTCATGTCCATCACTGAAGGAGAGAAAAAGCCGTTTGACTTTTTACGTCTTCTATATGATGGTTGCATTGCTGGAGGTGTTGCGGGTGTCATGGTAGAAACAGCTTTATACCCCATTGATACCATCAAAACTCGACTACAGGTAGCTCGTGATGGAGGAAAAATTGTTCTGAAGGGTCTGTACTCTGGACTGTCTGGAAATCTTGTTGGTGTCTTGCCAGCGTCTGCAATTTTTATTGGAGTGTATGAACCCACAAAGCAGCAATTGCTAAAGTCATTGCCTGAGAATCTCAGTGCTGTGGCTCATTTTGCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTGTTGTTCGGGTTCCAACAGAGGTTATTAAGCAAAGGATGCAAATTGGGCAATTTAGATCAGCCCCAGATGCTGTTCGTCTCATTGTCTCAAATGAGGGTTTTAGAGGTCTTTATGCGGGATATGGATCTTTCTTATTGCGAGATTTACCATTTGATGCCATTGAATTATGCATTTATGAGCAGCTCCGTATTGGGTATAAATTAGCGGCGAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGGTGCCATAACTGGAGCAGTCACAACTCCTCTTGATGTAGTAAAGACCAGATTGATGGTTCAGGGATCACAAAAGCATTACAAAGGCATCAGTGATTGTGTGAGGACAATAATTAAAGAAGAAGGAACTCGTGCTCTTTTTAAGGGTATTGGGCCTAGAGTTTTGTGGATAGGAGTTGGAGGTTCAATATTTTTTTGTGTTCTTGAGAAGACAAAGCGAATTCTTGCTCAGAATCGCCACCCCAAAGCTTAG 882 0.4286 MSVQKDPDKFFMSITEGEKKPFDFLRLLYDGCIAGGVAGVMVETALYPIDTIKTRLQVARDGGKIVLKGLYSGLSGNLVGVLPASAIFIGVYEPTKQQLLKSLPENLSAVAHFAAGAIGGIASSVVRVPTEVIKQRMQIGQFRSAPDAVRLIVSNEGFRGLYAGYGSFLLRDLPFDAIELCIYEQLRIGYKLAAKRDPNDPENAMLGAVAGAITGAVTTPLDVVKTRLMVQGSQKHYKGISDCVRTIIKEEGTRALFKGIGPRVLWIGVGGSIFFCVLEKTKRILAQNRHPKA* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01288 293 Pfam Mitochondrial carrier protein 107 187 IPR018108 -
Phac7g01288 293 Pfam Mitochondrial carrier protein 32 63 IPR018108 -
Phac7g01288 293 Pfam Mitochondrial carrier protein 202 288 IPR018108 -
Phac7g01288 293 ProSiteProfiles Solute carrier (Solcar) repeat profile. 25 98 IPR018108 -
Phac7g01288 293 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 30 293 - -
Phac7g01288 293 Gene3D Mitochondrial carrier domain 31 292 IPR023395 -
Phac7g01288 293 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 189 IPR018108 -
Phac7g01288 293 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 18 290 - -
Phac7g01288 293 SUPERFAMILY Mitochondrial carrier 32 279 IPR023395 -
Phac7g01288 293 PRINTS Mitochondrial carrier protein signature 164 184 IPR002067 GO:0055085
Phac7g01288 293 PRINTS Mitochondrial carrier protein signature 257 275 IPR002067 GO:0055085
Phac7g01288 293 PRINTS Mitochondrial carrier protein signature 213 231 IPR002067 GO:0055085
Phac7g01288 293 PRINTS Mitochondrial carrier protein signature 125 139 IPR002067 GO:0055085
Phac7g01288 293 PRINTS Mitochondrial carrier protein signature 112 125 IPR002067 GO:0055085
Phac7g01288 293 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 284 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01288 Phac-Chr7 8538496 8546582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01288 115 287 Chloroplast and Mitochondria Gene Families AT2G30160 29.834 8.08e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01288 K15111 - gmx:100800051 523.857