Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01287 ATGACCTCGAAAATTCCCCCACCAGATTCAATTGATGCATTGAAGTCTAAAATGTCTGTTCAGAAGGACCCAGATAAGTTCTTCATGTCCATCACTGAAGGAGAGAAAAAGCCGTTTGACTTTTTACGTCTTCTATATGATGGTTGCATTGCTGGAGGTGTTGCGGGTGTCATGGTAGAAACAGCTTTATACCCCATTGATACCATCAAAACTCGACTACAGGTAGCTCGTGATGGAGGAAAAATTGTTCTGAAGGGTCTGTACTCTGGACTGTCTGGAAATCTTGTTGGTGTCTTGCCAGCGTCTGCAATTTTTATTGGAGTGTATGAACCCACAAAGCAGCAATTGCTAAAGTCATTGCCTGAGAATCTCAGTGCTGTGGCTCATTTTGCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTGTTGTTCGGGTTCCAACAGAGGTTATTAAGCAAAGGATGCAAATTGGGCAATTTAGATCAGCCCCAGATGCTGTTCGTCTCATTGTCTCAAATGAGGGTTTTAGAGGTCTTTATGCGGGATATGGATCTTTCTTATTGCGAGATTTACCATTTGATGCCATTGAATTATGCATTTATGAGCAGCTCCGTATTGGGTATAAATTAGCGGCGAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGGTGCCATAACTGGAGCAGTCACAACTCCTCTTGATGTAGTAAAGACCAGATTGATGGTTCAGGGATCACAAAAGCATTACAAAGGCATCAGTGATTGTGTGAGGACAATAATTAAAGAAGAAGGAACTCGTGCTCTTTTTAAGGGTATTGGGCCTAGAGTTTTGTGGATAGGAGTTGGAGGTTCAATATTTTTTTGTGTTCTTGAGAAGACAAAGCGAATTCTTGCTCAGAATCGCCACCCCAAAGCTTAG 933 0.4266 MTSKIPPPDSIDALKSKMSVQKDPDKFFMSITEGEKKPFDFLRLLYDGCIAGGVAGVMVETALYPIDTIKTRLQVARDGGKIVLKGLYSGLSGNLVGVLPASAIFIGVYEPTKQQLLKSLPENLSAVAHFAAGAIGGIASSVVRVPTEVIKQRMQIGQFRSAPDAVRLIVSNEGFRGLYAGYGSFLLRDLPFDAIELCIYEQLRIGYKLAAKRDPNDPENAMLGAVAGAITGAVTTPLDVVKTRLMVQGSQKHYKGISDCVRTIIKEEGTRALFKGIGPRVLWIGVGGSIFFCVLEKTKRILAQNRHPKA* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01287 310 PRINTS Mitochondrial carrier protein signature 274 292 IPR002067 GO:0055085
Phac7g01287 310 PRINTS Mitochondrial carrier protein signature 142 156 IPR002067 GO:0055085
Phac7g01287 310 PRINTS Mitochondrial carrier protein signature 129 142 IPR002067 GO:0055085
Phac7g01287 310 PRINTS Mitochondrial carrier protein signature 181 201 IPR002067 GO:0055085
Phac7g01287 310 PRINTS Mitochondrial carrier protein signature 230 248 IPR002067 GO:0055085
Phac7g01287 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 301 IPR018108 -
Phac7g01287 310 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 47 310 - -
Phac7g01287 310 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 29 307 - -
Phac7g01287 310 Gene3D Mitochondrial carrier domain 48 309 IPR023395 -
Phac7g01287 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 206 IPR018108 -
Phac7g01287 310 SUPERFAMILY Mitochondrial carrier 49 296 IPR023395 -
Phac7g01287 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 42 115 IPR018108 -
Phac7g01287 310 Pfam Mitochondrial carrier protein 219 305 IPR018108 -
Phac7g01287 310 Pfam Mitochondrial carrier protein 49 80 IPR018108 -
Phac7g01287 310 Pfam Mitochondrial carrier protein 124 204 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01287 Phac-Chr7 8538496 8546582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01287 132 304 Chloroplast and Mitochondria Gene Families AT2G30160 29.834 7.45e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01287 K15111 - gmx:100800051 523.857