Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01262 ATGGGCTGTGTTCAGGCCAAGCCATTGGATTCGGAAGGTCCAGACTACAGGAGCCTGGAGAGGTTGAAGTTGGATAATGGGTATGTCGCAAGTTCTGACTTTGTTGCTCATAGGAGATCCACTGGTCAAAGACATGACCCCAATAAGGACCATCATAGGCTGCATCAGCCTCAGAGAGAACAACCCATAAAGGATAAACTTAAGTCTGGTGTTGCCAATGATGGCGCTGGGCATCATAAGGGCAGGGTGGTTGGAAGAGAGGGGAGGCGAGTCACGCGTCGTGATGATAAGAAATTGGCAAACAAGTGTTGCTTTGAGGATGAGATGGTAGATGGGTGGCCAAGGTGGTTGGTTGATAATGTTCCTGCACAAGTGTTGGCTGGCTTGGTTCCTAGGAGTGCTGAATCCTACAAAATGATTGATAAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCTCTGGATCGAGAGACAGGAGAAATTGTGGCCATGAAGAAGGTTCGCTTCAATACATCAGAGCCTGAAAGCATAAAGTTTATGGCAAGAGAAATTACGATATTACAGAGACTGGATCATCCCAATGTAGTCAAACTTAAAGGATTAGCCACTTCAAGAATGCAGTACAGTATATATCTAGTTTTTGACTTCATGCAAACAGATTTGGCACGAGTTATTGCTCGTCCTGAAGAGAGACTATCAGAACCACAGGTCAAGTGCTATATGCATCAATTACTTTCAGGTCTGCAGCATTGCCATGACAGGGGAATTCTTCATCGAGATATAAAGGGGTCAAACCTTTTGATTGATAAAACTGGGATGCTTAAGATTGCAGATTTTGGACTTGCCAATTTTTATGGTCCAGATCATCATCAGCCTCTCACTAGCCGGGTTGTGACACTATGGTACAGAGCTCCTGAATTGTTGTTAGGTGACACAAACTATGGAGTTGGTGTTGATCTGTGGAGTGCTGGATGTCTCCTGGCAGAAATGTTCAAAGGATTCCCAATCATGCCTGGCAGAACTGAGGTTGAGCAAATTCATAAAATTTTCAGGCTATGTGGCACACCATCAGAGGAGTATTGGAGAAAATTGAAACTTTCTATAACTTTTAGACCTCCAAAGTCTTATAGACCCAGCCTTGTAGAAACTTTCGGGGATCTCCCTCCATCTTCTTTAGGTCTTTTATGCACTTTGCTTGCTTTGGATCCTGCATTCCGTGGAACTGCATCTAAAGCTCTTAAAAATCAGTTTTTCTTTACAAGCCCATTGGCATGTGACCTCTCTGGTATGCCTGTAATCTTCAGAGAGGATGATGAGCGTGTTCAAGCCAACGAACAGATCAAGTAA 1350 0.4378 MGCVQAKPLDSEGPDYRSLERLKLDNGYVASSDFVAHRRSTGQRHDPNKDHHRLHQPQREQPIKDKLKSGVANDGAGHHKGRVVGREGRRVTRRDDKKLANKCCFEDEMVDGWPRWLVDNVPAQVLAGLVPRSAESYKMIDKVGQGTYSNVYKALDRETGEIVAMKKVRFNTSEPESIKFMAREITILQRLDHPNVVKLKGLATSRMQYSIYLVFDFMQTDLARVIARPEERLSEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKTGMLKIADFGLANFYGPDHHQPLTSRVVTLWYRAPELLLGDTNYGVGVDLWSAGCLLAEMFKGFPIMPGRTEVEQIHKIFRLCGTPSEEYWRKLKLSITFRPPKSYRPSLVETFGDLPPSSLGLLCTLLALDPAFRGTASKALKNQFFFTSPLACDLSGMPVIFREDDERVQANEQIK* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01262 449 Gene3D Transferase(Phosphotransferase) domain 1 220 432 - -
Phac7g01262 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Phac7g01262 449 FunFam Putative serine/threonine-protein kinase 220 449 - -
Phac7g01262 449 SMART serkin_6 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01262 449 ProSitePatterns Protein kinases ATP-binding region signature. 143 166 IPR017441 GO:0005524
Phac7g01262 449 ProSiteProfiles Protein kinase domain profile. 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01262 449 PANTHER CELL DIVISION PROTEIN KINASE 135 424 - -
Phac7g01262 449 SUPERFAMILY Protein kinase-like (PK-like) 132 423 IPR011009 -
Phac7g01262 449 Gene3D Phosphorylase Kinase; domain 1 127 219 - -
Phac7g01262 449 MobiDBLite consensus disorder prediction 38 90 - -
Phac7g01262 449 FunFam probable serine/threonine-protein kinase At1g54610 124 219 - -
Phac7g01262 449 Pfam Protein kinase domain 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01262 Phac-Chr7 8413091 8418238 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01262 132 433 Core Cell Cycle Gene Families AT5G10270 45.938 8.97e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phac7g01262 Pkinase 2.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01262 K08819 - gmx:100776854 775.007