Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01257 ATGGACCACGCTTTCCAAGCCATCGTCGCCGCCATAGGCAGCTTCTTCATCGTCACCCTACTCCTTGCCGGAGCCATCATACTCTGCCAGCAGTACCGCAACTCCTCCAAAGCCCGCACCCGCCAGAGATCAACCACACCCGCGCCCGCCCGCGACGCCTCTTTCTCTCTCGCCGTTGTCGACGCCAGCTGGTCCTCCGACCCCAACCTCATCAAGATCACGTGGGAGGAGCTCGCCGTCGCCACCGAAAACTTCTCCCCGCACCTCATCGTCGGTGACGGCAGCTTCGGCCTTGTCTACAAGGCCCGCCTCTCCACCAACGCCCTCGTCGCCGTCAAGAAGCTCTCCCCCGACGCCTTCCAGGGCTTCCGCGAGTTCAGGGCGGAGATGGAAACCCTAAGCAAGCTCAACCACCCAAACATCGTCAGAATCCTCGGGTACTGGGCCTCCGGCCCAGAACGTTTACTCGTCTATGAGTTCATCGAAAAGGGAAACCTCGATCAGTGGCTCCACGAGCCCGATCCCTCTCGCACCCCCCTGTCCTGGGAAACTCGCGTCAACATCATCCGCGGCGTGGCCCACGGGCTTTCCTACCTCCACGGGCTCGAGAAGCCCGTCATTCATCGCGACATAAAGGCCAGCAACATCTTGCTGGACTCCAAGTTCCATGCCCACATCGCTGACTTTGGGCTGGCGCGCAGGATCGATAAAACGCACTCCCACGTCTCCACACAGTTCGCGGGCACAATGGGGTACATGCCGCCCGAATACATTGAAGGGTCGAATGTGGCGAACACGAAGGTGGATGTTTATAGTTTTGGGATTTTGATGATTGAGACCATGTCCAGTCACCGGCCCAATTTGCCGATGAAATTGGGCGAGAATGACATTGGGATTGTCCAGTGGGCCAAAAAGATGAGGGAGCAAAATGCGGAGATGGATATGGTTGATGTGAATATTTCAAGAGAAGGGTTGAGTGAGGAGAGTGTTAGGGAGTATGTACGCATCGCTTGTGAGTGCACCAGCGCGATGCAGAAGGAAAGACCCGAAATGCCACAAGTTCTCCAATGCTTGTCCTCCATCCCACCCAGTCTTTTTATCTCATCCTAA 1110 0.5676 MDHAFQAIVAAIGSFFIVTLLLAGAIILCQQYRNSSKARTRQRSTTPAPARDASFSLAVVDASWSSDPNLIKITWEELAVATENFSPHLIVGDGSFGLVYKARLSTNALVAVKKLSPDAFQGFREFRAEMETLSKLNHPNIVRILGYWASGPERLLVYEFIEKGNLDQWLHEPDPSRTPLSWETRVNIIRGVAHGLSYLHGLEKPVIHRDIKASNILLDSKFHAHIADFGLARRIDKTHSHVSTQFAGTMGYMPPEYIEGSNVANTKVDVYSFGILMIETMSSHRPNLPMKLGENDIGIVQWAKKMREQNAEMDMVDVNISREGLSEESVREYVRIACECTSAMQKERPEMPQVLQCLSSIPPSLFISS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01257 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Phac7g01257 369 SUPERFAMILY Protein kinase-like (PK-like) 66 358 IPR011009 -
Phac7g01257 369 Gene3D Transferase(Phosphotransferase) domain 1 161 361 - -
Phac7g01257 369 ProSiteProfiles Protein kinase domain profile. 85 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01257 369 Pfam Protein kinase domain 90 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01257 369 CDD STKc_IRAK 91 361 - -
Phac7g01257 369 FunFam Phytosulfokine receptor 2 161 362 - -
Phac7g01257 369 FunFam Phytosulfokine receptor 2 44 160 - -
Phac7g01257 369 Gene3D Phosphorylase Kinase; domain 1 53 160 - -
Phac7g01257 369 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 361 - -
Phac7g01257 369 SMART serkin_6 85 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01257 369 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01257 Phac-Chr7 8387716 8391325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01257 70 361 Receptor kinase-like Gene Family AT5G07280 45.578 1.20e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Phac7g01257 Pkinase 9.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01257 - - gmx:100802728 588.956