Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01254 ATGGATCCTTTTACTGAAGAGTTGCCTCAGTACATACATATAAATCAAAATGAGTTTTTCATGCGAAGGCAGAAGAAGCAGAAGGAGGAGGATATTGCTATATGTGAATGCAAATACGATGCTAATGACACTGACAGTGCATGCGGGGATAGCTGCTTGAATGTTTTAACCAGCACGGAATGCACCCCTGGTTATTGCCCTTGTGATATCTTATGCAAAAATCAGAAATTTCAGAAGTGTGAATATGCTAAAACAAAGTTGTTTAAGACTGAAGGCCGTGGATGGGGTCTTTTGGCTGGTGAGGATCTGAAGGCAGGACAATTTGTCATCGAATACTGTGGAGAAGTAATATCATGGAAAGAAGCCAAACGTAGATCCCAGGCTTATGAAAATCAAGGCCTTAAAGATGCATTTATCATTTGCCTTAATGCATCTGAATCTATTGATGCAACCAGGAAAGGAAGCCTTGCTAGATTTATAAATCATTCCTGTCAACCGAATTGTGAGACGAGAAAATGGAATGTGTTGGGGGAAATAAGAGTTGGAATATTTGCAAAACATGATGTTCCTATTGGAACTGAATTAGCTTATGATTATAATTTTGAATGGTTTGGAGGTGCAAAGGTTCGTTGCCTATGTGGTGCACTCAAATGTTCAGGGTTCCTTGGAGCAAAATCTCGTGGTTTTCAGGTAATCTTTACTGAGGTAGTTTTAACCCCACAAAAATTAAGTGCTTGGATGAATCCTTTTGTATGCTTTGCATGGCGTGATTGTTGTAATCTTGTAGACCATGAGCTTTTTAAGTTCTGTTTCTGA 816 0.3909 MDPFTEELPQYIHINQNEFFMRRQKKQKEEDIAICECKYDANDTDSACGDSCLNVLTSTECTPGYCPCDILCKNQKFQKCEYAKTKLFKTEGRGWGLLAGEDLKAGQFVIEYCGEVISWKEAKRRSQAYENQGLKDAFIICLNASESIDATRKGSLARFINHSCQPNCETRKWNVLGEIRVGIFAKHDVPIGTELAYDYNFEWFGGAKVRCLCGALKCSGFLGAKSRGFQVIFTEVVLTPQKLSAWMNPFVCFAWRDCCNLVDHELFKFCF* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01254 271 ProSiteProfiles AWS domain profile. 30 81 IPR006560 GO:0005634|GO:0042054
Phac7g01254 271 SUPERFAMILY SET domain 9 220 IPR046341 -
Phac7g01254 271 ProSiteProfiles SET domain profile. 83 200 IPR001214 GO:0005515
Phac7g01254 271 Pfam AWS domain 43 80 IPR006560 GO:0005634|GO:0042054
Phac7g01254 271 ProSiteProfiles Post-SET domain profile. 207 223 IPR003616 -
Phac7g01254 271 SMART shorttest3 30 82 IPR006560 GO:0005634|GO:0042054
Phac7g01254 271 PANTHER SET DOMAIN PROTEINS 8 230 - -
Phac7g01254 271 Gene3D SET domain 3 230 IPR046341 -
Phac7g01254 271 FunFam Histone-lysine N-methyltransferase 1 234 - -
Phac7g01254 271 Pfam SET domain 94 200 IPR001214 GO:0005515
Phac7g01254 271 SMART set_7 83 206 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01254 Phac-Chr7 8378041 8386048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01254 65 223 C2H2 Transcription Factor Family AT2G23740 33.333 1.98e-22 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac7g01254 SET 1.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01254 - - gmx:100804657 464.151