Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01240 ATGGTGGAGTCGGCTTGGGTGACGGGTTCAGTGGTGACTACCCCTGAATTTGAACCAGTAAATGCAAAGTTTCCAATTTTTGATTCCCAGTTAGCAGTGGAAGTCGAAGAAGAAGCACTAAGGGCGTTAGCGGGGAAGAAGGCGGTGATTGTGCGAACCTTCGATGAGGGCACGCGCGAGCGCCCCTACGGTCACTGTTTCGTTGCAGGGATAAAGAAGTATGGTGATAAAGAAGGACTCCGCCAAGAAGACCGCGAAGGCCTTCATCAAGAAGTACCGGACTCCGCCAAGAAGACCGCGAAGGCCTTCATCAAGGTTGTCAACTACCGGCACTTGATTCCCACGCGCTACACGCGCGAGCGCCCCTACCGTCACTGTTTGGTTGCAGGGATAAAGAAGTACACTAGCATGGTGATAAAGAACGACTCCGCCAAGAAGTCGCAGGTGAAGGCCTTCATCAAGCTCGTCAACTACCCGCACTTGATGCCCACGCGCTACACGCTCGACGTGGACCTCAAGAACGCCGTCTCCGCCGACGTCCCCCACGCCACTGCCTCGAGGATCGTTTCAAAACCGGCACGATGGTTCTTCACCATGCAGGTTGTTCTGAGCAAAATTGTACGTTTTTTGTTTTCAACCGTTTTCATTGGATCTCGCTTTGTCCTTTTAATTATTCCTTTATAA 684 0.519 MVESAWVTGSVVTTPEFEPVNAKFPIFDSQLAVEVEEEALRALAGKKAVIVRTFDEGTRERPYGHCFVAGIKKYGDKEGLRQEDREGLHQEVPDSAKKTAKAFIKVVNYRHLIPTRYTRERPYRHCLVAGIKKYTSMVIKNDSAKKSQVKAFIKLVNYPHLMPTRYTLDVDLKNAVSADVPHATASRIVSKPARWFFTMQVVLSKIVRFLFSTVFIGSRFVLLIIPL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01240 227 Pfam Ribosomal L27e protein family 139 187 IPR001141 GO:0003735|GO:0005840|GO:0006412
Phac7g01240 227 Pfam Ribosomal L27e protein family 97 120 IPR001141 GO:0003735|GO:0005840|GO:0006412
Phac7g01240 227 SUPERFAMILY Translation proteins SH3-like domain 44 121 IPR008991 -
Phac7g01240 227 Gene3D - 41 119 IPR038655 -
Phac7g01240 227 Gene3D - 120 214 IPR038655 -
Phac7g01240 227 CDD KOW_RPL27 44 118 IPR041991 -
Phac7g01240 227 PANTHER 60S RIBOSOMAL PROTEIN L27 118 188 IPR001141 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01240 Phac-Chr7 8214854 8215713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01240 118 190 Cytoplasmic Ribosomal Protein Gene Family AT4G15000 59.740 2.06e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01240 K02901 - gmx:100799485 106.301