Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01212 ATGCTTGGGGACTCAGCTGTGTTGGGAGCAGGAGGCGGAAGTGGCGGTGGGGAAGGTGGCGCCTCCGTCGATGCAGTGGCCGGGGTCACGCATGACGGGGCGGTGGTGGCGAGCGGAGGCGGTGGCGGAGTTGGATCAAATTCGGGGGACGACGAAAGGGGTAGAATCGACGAGGGAGAACGTAGCTTCGGTGGTAACCGGTGGCCCCGACAAGAGACTTTGGCGCTGTTAAGGATACGGAAGGATATGGACGTGGCGTTTCGAGATGCAAGTGTTAAGGGTCCTTTGTGGGAAGAAGTATCCAGGAAAATGGCAGAGCTTGGGTATCACAGAAGTTCCAAGAAGTGCAAAGAGAAATTCGAGAACGTGTACAAGTACCACAAGAGAACCAAAGAAGGTCGAAGTGGGAAACAAGATGGAAAAACATATCGTTTCTTTGATCAACTACAAGCCCTTGAGAATCACACTCCAACACCGCACTCTCCCAACCCATCACCAAAACCACCACAATCAGCGCCATCAAGAGTAATTGCAACCACAGCTGCATCAGTGTCACTACCAATTCCAACAGCAACAGCAACAGCAACTGCTTCATCATTGTCACTTCCAATTCCAACAACAATAACAACAGTGCCAATGCAGCCAATACTGACCAACACCACTCTCACTAGTACTGTCCCCCATATCACTGTTCCATCAACAACAACACTCCCTATAACCATACCCCAGCCCATTCTCACTACCCCATCAATACATCTCTCAATTCCTTCTTACCCTCCAACAAACCCTACCACCAACACAACCCCACCACCCTCTTTCCCCACGCTCCCCACCGACACCTTCTCCAATTCTAGCTCCTCCTCCACCTCCTCCGACGAAACATTGGAAGGTAGGCGCAAGAGGAAGCGCAAATGGAAGGATTTCTTCGAGAGACTAATGAAGGAAGTGATCGAGAAGCAAGAGGATCTACAAAAGAAGTTCTTGGAAGCCATAGAGAAACGAGAACACGACAGAATAGCAAGAGAAGAAGCATGGAGAGTCCAGGAGATGCAAAGAATCAATAGAGAGAGAGAAATCCTCGCACAAGAAAGATCCATAGCCGCAGCCAAAGACGCCGCCGTCATGTCATTCCTTCAAAAAATAGCCGAACAACAAAACCTCGGTCAAGCATTGAGCAACATCAACCTCGTACAACAACCACCACACCAACAACCTCAACCGCCACTGCAACAACTACCACCATCTAGTGTAGCGCCACCTCCTGCACAACAACCACTGCCCGCGGTTGTTACACAGCCAGTGGTGTTGCCAGTCTTCTCACAAGTGACCAACATGGAGATAGTTAAAGTTGACAACAATAACAACAACAATAGTTGTGAGAATTTCACGCCATCGAGTTCTTCAAGGTGGCCAAAGGTGGAGGTTCAGGCATTGATAAAGCTTCGAACGAACCTGGATTCAAAGTATCAAGAGAACGGACCAAAGGGCCCTCTCTGGGAGGAGATCTCATCCTCAATGAGGAAGCTCGGGTACATCCGAAACGCGAAAAGGTGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAAGAAAGTGAAGGAAAGCAACAAGCGGAGACCGGAAGATTCCAAAACGTGCCCTTATTTCCACCAGCTTGACGCGCTGTACAGGGAGAGGAGCAAGGTGGAGGGCGTGGCGGCGGCGGTGAAGCCTGATAGCACGGTGGCGCCGCTGATGGTGCGGCCGGAGCAGCAATGGCCACCTCAGGAGGAATCGATGAGGGATAGGGATATGAGAATGGAGGACGTGGAGAATGAAGAGGATGAGTACGAGGAAGAGAGAGAGGGTGAGGGAGAGGAAGAAGAAGATGATGAAGAGGATGAAGAAGGTGGTGGTGGTGGGAAATATGAGATAGTGGCGAACAAAACAAGTGGTGGTTCAGTTGGGGCATCAACAGAATAG 1962 0.5041 MLGDSAVLGAGGGSGGGEGGASVDAVAGVTHDGAVVASGGGGGVGSNSGDDERGRIDEGERSFGGNRWPRQETLALLRIRKDMDVAFRDASVKGPLWEEVSRKMAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKQDGKTYRFFDQLQALENHTPTPHSPNPSPKPPQSAPSRVIATTAASVSLPIPTATATATASSLSLPIPTTITTVPMQPILTNTTLTSTVPHITVPSTTTLPITIPQPILTTPSIHLSIPSYPPTNPTTNTTPPPSFPTLPTDTFSNSSSSSTSSDETLEGRRKRKRKWKDFFERLMKEVIEKQEDLQKKFLEAIEKREHDRIAREEAWRVQEMQRINREREILAQERSIAAAKDAAVMSFLQKIAEQQNLGQALSNINLVQQPPHQQPQPPLQQLPPSSVAPPPAQQPLPAVVTQPVVLPVFSQVTNMEIVKVDNNNNNNSCENFTPSSSSRWPKVEVQALIKLRTNLDSKYQENGPKGPLWEEISSSMRKLGYIRNAKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDALYRERSKVEGVAAAVKPDSTVAPLMVRPEQQWPPQEESMRDRDMRMEDVENEEDEYEEEREGEGEEEEDDEEDEEGGGGGKYEIVANKTSGGSVGASTE* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01212 653 FunFam Trihelix transcription factor GT-2 470 531 - -
Phac7g01212 653 FunFam Trihelix transcription factor GT-2 68 129 - -
Phac7g01212 653 ProSiteProfiles Myb-like domain profile. 468 526 IPR001005 -
Phac7g01212 653 MobiDBLite consensus disorder prediction 262 276 - -
Phac7g01212 653 MobiDBLite consensus disorder prediction 154 175 - -
Phac7g01212 653 Coils Coil 593 623 - -
Phac7g01212 653 MobiDBLite consensus disorder prediction 1 66 - -
Phac7g01212 653 Pfam Myb/SANT-like DNA-binding domain 468 555 IPR044822 -
Phac7g01212 653 Pfam Myb/SANT-like DNA-binding domain 66 152 IPR044822 -
Phac7g01212 653 MobiDBLite consensus disorder prediction 401 425 - -
Phac7g01212 653 Coils Coil 306 333 - -
Phac7g01212 653 MobiDBLite consensus disorder prediction 252 300 - -
Phac7g01212 653 Gene3D - 68 129 - -
Phac7g01212 653 Gene3D - 470 531 - -
Phac7g01212 653 CDD GT1 468 533 - -
Phac7g01212 653 PANTHER FI21293P1 46 608 - -
Phac7g01212 653 MobiDBLite consensus disorder prediction 398 425 - -
Phac7g01212 653 CDD GT1 66 131 - -
Phac7g01212 653 ProSiteProfiles Myb-like domain profile. 66 124 IPR001005 -
Phac7g01212 653 MobiDBLite consensus disorder prediction 579 653 - -
Phac7g01212 653 MobiDBLite consensus disorder prediction 50 65 - -
Phac7g01212 653 MobiDBLite consensus disorder prediction 277 292 - -
Phac7g01212 653 MobiDBLite consensus disorder prediction 602 631 - -
Phac7g01212 653 SMART sant 466 528 IPR001005 -
Phac7g01212 653 SMART sant 64 126 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01212 Phac-Chr7 7942276 7945802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01212 60 586 Trihelix Transcription Factor Family AT1G76880 53.358 5.70e-162 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac7g01212 Myb_DNA-bind_4 9.4e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01212 - - pvu:PHAVU_007G079700g 936.791