Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01202 ATGGGGAGGAAGAAGCCGACTGCGAGGGACGAGGACAACGCCTCGCAGCAAGGAGGTGGCGGGAAATCTAAGAAGAAGGCGGTAGTCATCGACGACGATGAATATGCCATAGGAACGGGACTCTCTGAGGAGCCGGCGCCGGAAGATAAACCCGCTGCGGCGGGAAAGAAGAAAGGTAAGAAAGGCAATGCTAAAGGTAATAATAATAATAATGATGATGATGTTGATGATGACGAGGATGTACCTGAAGTTGTGTTTGCTGGGAAGAAGAAGGGGAAAAACAAGAAGAGCGGTAGTAACAGTGCGTTTACTGCATCTGGCTTTGGTGTGCTTGGTGATGAGGAAGGTGATGAAGAAGATAAATCTGAAGAGGATGGACCTGTGGTTAGTTTTTCGCGTAAGAAGGCATCGAACAAAGGAGGTGGTAGTTTGTTCAATGCATCAGCTTTTGTTGCTATCGATGATGATGATGCTGGTGGTGAGGAGGAGGAGGAGGAGGATGAGCCGGTGGTTAGTTTTACTGGAAAGAAAAAGTCCTCGAAGGGTTCGAAGAAAAGCGGTGGTAGTTTGTTCGCTGCCTCGGCTTTTGATGCTATTGATGATGGTGATGTGGTGGATGATAAGAATAACGATTTTGATGACGACGAACCTGTTATTGCTTTCACGGGGAAGAAGAAGTCTTCGAAAGGGAGTAAGAAGGGTGGTGCTGGGTTTTCAGCCACTGTTATCACTGAAATTGATGATGGAGAGGGCAAGGAGGATGGTGGTGGTGATGATGACGATGACATTGAACCAATTACTTTCACTGGCAAGAAAAAGAAGTCTTCCAAGAAGGCTGCAAGTTCCGGTAGCAAAGGTGTTTCTGTTGGGGATGATGTTTCTGTACCCGAATCTGGTAAGGATGGTGATGACAAGGATGAGGACGATGTTTCTTTAGTTTCGTTTTCAGGTAAAAAGAAGTCGTCTAAAAAGAAGGGCAGTAGTACTGCTGCCAAAGGGAGTGATGAAAATGTGGATGTAGTGGAGCCTGAGGCACCCAGTATTGGTAGTGCTGATGCTAGCAATAACAATGTAAATAAGAGTGAAGGAGTTGCTGAAACTTCCAAAAATAAGAAGAAGAATAAGAAAAAGAGTGGAAGAACTGCTCAAGAGGAAGAAGATTTGGATAAGCTTCTTGCAGAGCTCGGTGAGGCTCCTATACCAAAACCAACTACTTCTGCACCACAAGATGATAAAGTTCAGCCTACTCCTGAAGTAGCTCCTGTTGCTGCTGATGCTTCTGGGGATAAGGATGGGGAAGAGGAGGTGGTAGAATCAGCTGCTGCAAAGAAGAAGAAGAAGAAAAAGGAAAAGGAAAAGGAGAAGAAGGCAGCTGCCGCCGCCACAGCAGGAAGTGCACCAGAAAATGAATCAGCAGAAGTTAAAGCTGAGGCAATTGAACCAAAGAAGAATGACTCAAAGGCTAAGGCAGCTGATAAGAAAGTGCCAAAGCATGTTAGAGAGATGCAAGAGGCACTAGCTCGAAGAAAAGAGGCTGAAGAAAAGAAGAAAAGAGAAGACGAAGAGAGGTTAAAGAAGGAAGAAGAGGAGCGACGCAGGCAAGAGGAACTTGAGAGACAGGCAGAAGAAGCTAAACGTAGGAAGAAGGAAAGAGAAAAGGAAAAACTCCAGAAAAAAAAGCAAGAAGGTAAACTTTTAACTGGTAAGCAGAAGGAAGAAGCCCGTCGTTTGGAGGCAATGAGGAGGCAGATTCTCAATAGCACTGGGGGTGTGACTCTCCCTTCTGGGGACTCTGGTGCTCCAGCCAAAAAACCCATATACCAGACAAAGAAGTCAAAACAAAATAATAGAAATCAGAATGGAGCTGCTGCTCAGACAGCTGAAATTGTTGAAGCGAAGGAGATTACTACTGATGTAGTTTCAGAGGAACCAGTAAACATTGAAGAAGTGGAGTCGATTCAGGTGGATGACAAAGTTGAACTTCATGTCACTGCTGAAGATGATGTAGTGGAAGATGACGAAGATGATGAATGGGATGCAAAAAGCTGGGATGATGTTAATCTGAATGCCAAAGGTGCATTTGCTGACGAAGAGTCAGAACCTAAACCTGTTATCAAAAAAGAGATTAAAAATGCCGTACCTACTCAGAACGCTGGGGCTACTAGTACAACTGTCACTGATGAAACTGAAAATGGAAAGCAAGCTAATGTTGTGGTTACGGACAGAAATAAGAAGCATGATTCTGACTTGAATAGGTCAAGAAAGTCTGCTGCTCCGCCTCAGCCTAATGATGAAAACCTCCGCTCCCCAATTTGCTGTATCATGGGGCATGTGGATACTGGCAAGACCAAGCTGCTGGATTGTATTCGAGGTACTAATGTTCAGGAGGGTGAGGCTGGAGGTATCACACAACAGATTGGTGCAACATACTTTCCTGCTGAGAATATACGTGATAGAACGAAGGAACTGAAAGCTGATGCAAAGCTGAAAGTTCCTGGTCTACTGGTTATTGACACCCCTGGGCACGAGTCTTTCACTAACTTGAGGTCTCGGGGTTCAGGCCTATGTGATATTGCAATTTTGGTCGTTGACATTATGCATGGGTTAGAGCAACAAACAATAGAATCACTAAATCTATTAAAAATGAGGAACACAGAATTCATTGTTGCGTTAAATAAAGTTGACAGGCTTTATGGATGGAAAACATGTCGCAATTCTCCAATTGTCAAAGCATTGAAGCAGCAGACTAAGGATGTTCAAAATGAGTTTAATATGAGGCTCACTCAGATTGTTACTCAATTCAAAGAACAAGGGATGAATACCGAGTTGTACTATAAAAACAAAGAAATGGGAGAAACTTTCAGCATTGTGCCTACCAGTGCAATAAGTGGCGAAGGAATTCCTGATTTGTTATTACTATTGGTTCAATGGACCCAGAAAACAATGGTTGAGAAACTTACATACAGTGAGGAAGTACAGTGTACTGTTTTAGAGGTTAAGGTTGTTGAAGGCCATGGAACTACCATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGAACAAATAGTTGTCTGCGGAATGCAGGGTCCAATTGTTACCTCAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTCAAGGGAACATATCTTCATCACAAAGAAATCAAAGCTGCAATGGGTATAAAAATCACTGCCCAGGGCCTTGAGCATGCCATTGCGGGCACTGGTTTATATGTGGTGAAGCCTGATGATGATTTGGAAGATGTCAAAGAATCAGCAATGGAAGATATGAGGTCAGTCATGAGCAGGATTGACAGGACTGGTGAAGGTGTTTGTGTACAGGCATCTACCCTTGGTTCCTTGGAAGCATTACTGGAGTTTTTGAAAACTCCAGAAGTTAGTATCCCTGTTAGTGGTATAAGCATTGGTCCTGTACACAAAAAAGATGTCATGAAGGCCAGTGTAATGCTTGAAAAAAAGCGAGAGTATGCAGCTATATTGGCATTTGATGTCAAAGTTACACCTGAGGCTAGGGAACTGGCAGATGAATTGGGTGTGAAGATATTTATTGCTGATATCATTTATCATCTATTTGATCAATTTAAAGCTTATATTGACAACATCAAAGAGGAGAAAAAGAAAGAAGCTGCTGATGAGGCAGTCTTCCCATGTGTTTTTAAAATCTTACCAAATTGCATTTTCAACAAGAAGGACCCAATTGTTTTGGGAGTTGATATTCTTGAAGGCATTGCAAAGATTGGGACTCCAATTTGCATTCCTTCTAGAGAGTTCATTGATATTGGTCGCATTGCCTCCATTGAGAATAACCATAAACCTGTTGATTATGCCAAGAAGGGGCAGAAAGTAGCCATTAAGATTGTTGGCAGCAATTCTGAAGAGCAACAGAAAATGTTTGGGAGACATTTTGAGATCGATGATGAACTTGTAAGCCATATTTCACGGAGATCTATTGATATTCTCAAAGCAAATTATCGGGATGAACTATCTATGGAGGAATGGAGGTTGCTTGTGAAATTGAAGAATCTTTTCAAGATACAATGA 4080 0.426 MGRKKPTARDEDNASQQGGGGKSKKKAVVIDDDEYAIGTGLSEEPAPEDKPAAAGKKKGKKGNAKGNNNNNDDDVDDDEDVPEVVFAGKKKGKNKKSGSNSAFTASGFGVLGDEEGDEEDKSEEDGPVVSFSRKKASNKGGGSLFNASAFVAIDDDDAGGEEEEEEDEPVVSFTGKKKSSKGSKKSGGSLFAASAFDAIDDGDVVDDKNNDFDDDEPVIAFTGKKKSSKGSKKGGAGFSATVITEIDDGEGKEDGGGDDDDDIEPITFTGKKKKSSKKAASSGSKGVSVGDDVSVPESGKDGDDKDEDDVSLVSFSGKKKSSKKKGSSTAAKGSDENVDVVEPEAPSIGSADASNNNVNKSEGVAETSKNKKKNKKKSGRTAQEEEDLDKLLAELGEAPIPKPTTSAPQDDKVQPTPEVAPVAADASGDKDGEEEVVESAAAKKKKKKKEKEKEKKAAAAATAGSAPENESAEVKAEAIEPKKNDSKAKAADKKVPKHVREMQEALARRKEAEEKKKREDEERLKKEEEERRRQEELERQAEEAKRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRRQILNSTGGVTLPSGDSGAPAKKPIYQTKKSKQNNRNQNGAAAQTAEIVEAKEITTDVVSEEPVNIEEVESIQVDDKVELHVTAEDDVVEDDEDDEWDAKSWDDVNLNAKGAFADEESEPKPVIKKEIKNAVPTQNAGATSTTVTDETENGKQANVVVTDRNKKHDSDLNRSRKSAAPPQPNDENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRDRTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNSPIVKALKQQTKDVQNEFNMRLTQIVTQFKEQGMNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYSEEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGEQIVVCGMQGPIVTSIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKPDDDLEDVKESAMEDMRSVMSRIDRTGEGVCVQASTLGSLEALLEFLKTPEVSIPVSGISIGPVHKKDVMKASVMLEKKREYAAILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNIKEEKKKEAADEAVFPCVFKILPNCIFNKKDPIVLGVDILEGIAKIGTPICIPSREFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELVSHISRRSIDILKANYRDELSMEEWRLLVKLKNLFKIQ* 1360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01202 1359 Pfam Elongation factor Tu domain 2 1006 1081 IPR004161 GO:0005525
Phac7g01202 1359 MobiDBLite consensus disorder prediction 714 738 - -
Phac7g01202 1359 MobiDBLite consensus disorder prediction 349 364 - -
Phac7g01202 1359 Gene3D Translation factors 1222 1359 - -
Phac7g01202 1359 MobiDBLite consensus disorder prediction 709 767 - -
Phac7g01202 1359 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 323 1355 IPR015760 -
Phac7g01202 1359 MobiDBLite consensus disorder prediction 427 445 - -
Phac7g01202 1359 CDD aeIF5B_II 991 1101 - -
Phac7g01202 1359 PRINTS GTP-binding elongation factor signature 851 862 IPR000795 GO:0003924|GO:0005525
Phac7g01202 1359 PRINTS GTP-binding elongation factor signature 771 784 IPR000795 GO:0003924|GO:0005525
Phac7g01202 1359 PRINTS GTP-binding elongation factor signature 835 845 IPR000795 GO:0003924|GO:0005525
Phac7g01202 1359 PRINTS GTP-binding elongation factor signature 887 896 IPR000795 GO:0003924|GO:0005525
Phac7g01202 1359 MobiDBLite consensus disorder prediction 378 393 - -
Phac7g01202 1359 Pfam Translation-initiation factor 2 1095 1208 IPR023115 -
Phac7g01202 1359 Coils Coil 437 462 - -
Phac7g01202 1359 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1092 1221 IPR036925 -
Phac7g01202 1359 MobiDBLite consensus disorder prediction 155 169 - -
Phac7g01202 1359 FunFam Eukaryotic translation initiation factor 5B 761 989 - -
Phac7g01202 1359 Coils Coil 495 566 - -
Phac7g01202 1359 Gene3D Translation factors 990 1110 - -
Phac7g01202 1359 NCBIfam small GTP-binding protein domain 772 898 IPR005225 GO:0005525
Phac7g01202 1359 FunFam eukaryotic translation initiation factor 5B 990 1109 - -
Phac7g01202 1359 Gene3D - 761 989 IPR027417 -
Phac7g01202 1359 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 767 983 IPR000795 GO:0003924|GO:0005525
Phac7g01202 1359 MobiDBLite consensus disorder prediction 473 580 - -
Phac7g01202 1359 MobiDBLite consensus disorder prediction 665 684 - -
Phac7g01202 1359 MobiDBLite consensus disorder prediction 201 625 - -
Phac7g01202 1359 SUPERFAMILY Translation proteins 1226 1358 IPR009000 -
Phac7g01202 1359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 767 1058 IPR027417 -
Phac7g01202 1359 Pfam Elongation factor Tu GTP binding domain 771 979 IPR000795 GO:0003924|GO:0005525
Phac7g01202 1359 CDD IF2_eIF5B 770 980 - -
Phac7g01202 1359 MobiDBLite consensus disorder prediction 296 314 - -
Phac7g01202 1359 MobiDBLite consensus disorder prediction 608 625 - -
Phac7g01202 1359 CDD IF2_aeIF5B_IV 1230 1325 - -
Phac7g01202 1359 MobiDBLite consensus disorder prediction 739 753 - -
Phac7g01202 1359 Gene3D - 1111 1215 IPR036925 -
Phac7g01202 1359 MobiDBLite consensus disorder prediction 1 188 - -
Phac7g01202 1359 FunFam Eukaryotic translation initiation factor 5B 1109 1215 - -
Phac7g01202 1359 MobiDBLite consensus disorder prediction 666 681 - -
Phac7g01202 1359 FunFam Eukaryotic translation initiation factor 5B 1222 1359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01202 Phac-Chr7 7874420 7883616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01202 214 1359 Eukaryotic Initiation Factors Gene Family AT1G76810 65.140 0.0 1223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01202 K03243 - gmx:100814875 1779.22