Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01201 ATGGGGAGGAAGAAGCCGACTGCGAGGGACGAGGACAACGCCTCGCAGCAAGGAGGTGGCGGGAAATCTAAGAAGAAGGCGGTAGTCATCGACGACGATGAATATGCCATAGGAACGGGACTCTCTGAGGAGCCGGCGCCGGAAGATAAACCCGCTGCGGCGGGAAAGAAGAAAGGTAAGAAAGGCAATGCTAAAGGTAATAATAATAATAATGATGATGATGTTGATGATGACGAGGATGTACCTGAAGTTGTGTTTGCTGGGAAGAAGAAGGGGAAAAACAAGAAGAGCGGTAGTAACAGTGCGTTTACTGCATCTGGCTTTGGTGTGCTTGGTGATGAGGAAGGTGATGAAGAAGATAAATCTGAAGAGGATGGACCTGTGGTTAGTTTTTCGCGTAAGAAGGCATCGAACAAAGGAGGTGGTAGTTTGTTCAATGCATCAGCTTTTGTTGCTATCGATGATGATGATGCTGGTGGTGAGGAGGAGGAGGAGGAGGATGAGCCGGTGGTTAGTTTTACTGGAAAGAAAAAGTCCTCGAAGGGTTCGAAGAAAAGCGGTGGTAGTTTGTTCGCTGCCTCGGCTTTTGATGCTATTGATGATGGTGATGTGGTGGATGATAAGAATAACGATTTTGATGACGACGAACCTGTTATTGCTTTCACGGGGAAGAAGAAGTCTTCGAAAGGGAGTAAGAAGGGTGGTGCTGGGTTTTCAGCCACTGTTATCACTGAAATTGATGATGGAGAGGGCAAGGAGGATGGTGGTGGTGATGATGACGATGACATTGAACCAATTACTTTCACTGGCAAGAAAAAGAAGTCTTCCAAGAAGGCTGCAAGTTCCGGTAGCAAAGGTGTTTCTGTTGGGGATGATGTTTCTGTACCCGAATCTGGTAAGGATGGTGATGACAAGGATGAGGACGATGTTTCTTTAGTTTCGTTTTCAGGTAAAAAGAAGTCGTCTAAAAAGAAGGGCAGTAGTACTGCTGCCAAAGGGAGTGATGAAAATGTGGATGTAGTGGAGCCTGAGGCACCCAGTATTGGTAGTGCTGATGCTAGCAATAACAATGTAAATAAGAGTGAAGGAGTTGCTGAAACTTCCAAAAATAAGAAGAAGAATAAGAAAAAGAGTGGAAGAACTGCTCAAGAGGAAGAAGATTTGGATAAGCTTCTTGCAGAGCTCGGTGAGGCTCCTATACCAAAACCAACTACTTCTGCACCACAAGATGATAAAGTTCAGCCTACTCCTGAAGTAGCTCCTGTTGCTGCTGATGCTTCTGGGGATAAGGATGGGGAAGAGGAGGTGGTAGAATCAGCTGCTGCAAAGAAGAAGAAGAAGAAAAAGGAAAAGGAAAAGGAGAAGAAGGCAGCTGCCGCCGCCACAGCAGGAAGTGCACCAGAAAATGAATCAGCAGAAGTTAAAGCTGAGGCAATTGAACCAAAGAAGAATGACTCAAAGGCTAAGGCAGCTGATAAGAAAGTGCCAAAGCATGTTAGAGAGATGCAAGAGGCACTAGCTCGAAGAAAAGAGGCTGAAGAAAAGAAGAAAAGAGAAGACGAAGAGAGGTTAAAGAAGGAAGAAGAGGAGCGACGCAGGCAAGAGGAACTTGAGAGACAGGCAGAAGAAGCTAAACGTAGGAAGAAGGAAAGAGAAAAGGAAAAACTCCAGAAAAAAAAGCAAGAAGGTAAACTTTTAACTGGTAAGCAGAAGGAAGAAGCCCGTCGTTTGGAGGCAATGAGGAGGCAGATTCTCAATAGCACTGGGGGTGTGACTCTCCCTTCTGGGGACTCTGGTGCTCCAGCCAAAAAACCCATATACCAGACAAAGAAGTCAAAACAAAATAATAGAAATCAGAATGGAGCTGCTGCTCAGACAGCTGAAATTGTTGAAGCGAAGGAGATTACTACTGATGTAGTTTCAGAGGAACCAGTAAACATTGAAGAAGTGGAGTCGATTCAGGTGGATGACAAAGTTGAACTTCATGTCACTGCTGAAGATGATGTAGTGGAAGATGACGAAGATGATGAATGGGATGCAAAAAGCTGGGATGATGTTAATCTGAATGCCAAAGGTGCATTTGCTGACGAAGAGTCAGAACCTAAACCTGTTATCAAAAAAGAGATTAAAAATGCCGTACCTACTCAGAACGCTGGGGCTACTAGTACAACTGTCACTGATGAAACTGAAAATGGAAAGCAAGCTAATGTTGTGGTTACGGACAGAAATAAGAAGCATGATTCTGACTTGAATAGGTCAAGAAAGTCTGCTGCTCCGCCTCAGCCTAATGATGAAAACCTCCGCTCCCCAATTTGCTGTATCATGGGGCATGTGGATACTGGCAAGACCAAGCTGCTGGATTGTATTCGAGGTACTAATGTTCAGGAGGGTGAGGCTGGAGGTATCACACAACAGATTGGTGCAACATACTTTCCTGCTGAGAATATACGTGATAGAACGAAGGAACTGAAAGCTGATGCAAAGCTGAAAGTTCCTGGTCTACTGGTTATTGACACCCCTGGGCACGAGTCTTTCACTAACTTGAGGTCTCGGGGTTCAGGCCTATGTGATATTGCAATTTTGGTCGTTGACATTATGCATGGGTTAGAGCAACAAACAATAGAATCACTAAATCTATTAAAAATGAGGAACACAGAATTCATTGTTGCGTTAAATAAAGTTGACAGGCTTTATGGATGGAAAACATGTCGCAATTCTCCAATTGTCAAAGCATTGAAGCAGCAGACTAAGGATGTTCAAAATGAGTTTAATATGAGGCTCACTCAGATTGTTACTCAATTCAAAGAACAAGGGATGAATACCGAGTTGTACTATAAAAACAAAGAAATGGGAGAAACTTTCAGCATTGTGCCTACCAGTGCAATAAGTGGCGAAGGAATTCCTGATTTGTTATTACTATTGGTTCAATGGACCCAGAAAACAATGGTTGAGAAACTTACATACAGTGAGGAAGTACAGTGTACTGTTTTAGAGGTTAAGGTTGTTGAAGGCCATGGAACTACCATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGAACAAATAGTTGTCTGCGGAATGCAGGGTCCAATTGTTACCTCAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTCAAGGTATAG 3162 0.4361 MGRKKPTARDEDNASQQGGGGKSKKKAVVIDDDEYAIGTGLSEEPAPEDKPAAAGKKKGKKGNAKGNNNNNDDDVDDDEDVPEVVFAGKKKGKNKKSGSNSAFTASGFGVLGDEEGDEEDKSEEDGPVVSFSRKKASNKGGGSLFNASAFVAIDDDDAGGEEEEEEDEPVVSFTGKKKSSKGSKKSGGSLFAASAFDAIDDGDVVDDKNNDFDDDEPVIAFTGKKKSSKGSKKGGAGFSATVITEIDDGEGKEDGGGDDDDDIEPITFTGKKKKSSKKAASSGSKGVSVGDDVSVPESGKDGDDKDEDDVSLVSFSGKKKSSKKKGSSTAAKGSDENVDVVEPEAPSIGSADASNNNVNKSEGVAETSKNKKKNKKKSGRTAQEEEDLDKLLAELGEAPIPKPTTSAPQDDKVQPTPEVAPVAADASGDKDGEEEVVESAAAKKKKKKKEKEKEKKAAAAATAGSAPENESAEVKAEAIEPKKNDSKAKAADKKVPKHVREMQEALARRKEAEEKKKREDEERLKKEEEERRRQEELERQAEEAKRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRRQILNSTGGVTLPSGDSGAPAKKPIYQTKKSKQNNRNQNGAAAQTAEIVEAKEITTDVVSEEPVNIEEVESIQVDDKVELHVTAEDDVVEDDEDDEWDAKSWDDVNLNAKGAFADEESEPKPVIKKEIKNAVPTQNAGATSTTVTDETENGKQANVVVTDRNKKHDSDLNRSRKSAAPPQPNDENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRDRTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNSPIVKALKQQTKDVQNEFNMRLTQIVTQFKEQGMNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYSEEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGEQIVVCGMQGPIVTSIRALLTPHPMKELRVKV* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01201 1053 Gene3D Translation factors 989 1053 - -
Phac7g01201 1053 PRINTS GTP-binding elongation factor signature 835 845 IPR000795 GO:0003924|GO:0005525
Phac7g01201 1053 PRINTS GTP-binding elongation factor signature 771 784 IPR000795 GO:0003924|GO:0005525
Phac7g01201 1053 PRINTS GTP-binding elongation factor signature 851 862 IPR000795 GO:0003924|GO:0005525
Phac7g01201 1053 PRINTS GTP-binding elongation factor signature 887 896 IPR000795 GO:0003924|GO:0005525
Phac7g01201 1053 MobiDBLite consensus disorder prediction 714 738 - -
Phac7g01201 1053 MobiDBLite consensus disorder prediction 349 364 - -
Phac7g01201 1053 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 470 1052 IPR015760 -
Phac7g01201 1053 MobiDBLite consensus disorder prediction 709 767 - -
Phac7g01201 1053 MobiDBLite consensus disorder prediction 427 445 - -
Phac7g01201 1053 Pfam Elongation factor Tu GTP binding domain 771 979 IPR000795 GO:0003924|GO:0005525
Phac7g01201 1053 MobiDBLite consensus disorder prediction 378 393 - -
Phac7g01201 1053 Coils Coil 437 462 - -
Phac7g01201 1053 MobiDBLite consensus disorder prediction 155 169 - -
Phac7g01201 1053 Coils Coil 495 566 - -
Phac7g01201 1053 Gene3D - 761 988 IPR027417 -
Phac7g01201 1053 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 767 983 IPR000795 GO:0003924|GO:0005525
Phac7g01201 1053 MobiDBLite consensus disorder prediction 473 580 - -
Phac7g01201 1053 MobiDBLite consensus disorder prediction 665 684 - -
Phac7g01201 1053 MobiDBLite consensus disorder prediction 201 625 - -
Phac7g01201 1053 CDD IF2_eIF5B 770 980 - -
Phac7g01201 1053 MobiDBLite consensus disorder prediction 296 314 - -
Phac7g01201 1053 MobiDBLite consensus disorder prediction 608 625 - -
Phac7g01201 1053 MobiDBLite consensus disorder prediction 739 753 - -
Phac7g01201 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 767 1052 IPR027417 -
Phac7g01201 1053 MobiDBLite consensus disorder prediction 1 188 - -
Phac7g01201 1053 MobiDBLite consensus disorder prediction 666 681 - -
Phac7g01201 1053 FunFam Eukaryotic translation initiation factor 5B 761 989 - -
Phac7g01201 1053 NCBIfam small GTP-binding protein domain 772 898 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01201 Phac-Chr7 7874420 7883616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01201 214 1052 Eukaryotic Initiation Factors Gene Family AT1G76810 58.257 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01201 K03243 - gmx:100814875 1194.87