Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01188 ATGACGGTTTTTTGGGGCGTGTTTTGTGGGGAATCTGGTTGTTCGGAGGCGGGAAGAATGCCTTGCATTTATGACTTTAGACTTCTCATCGATCCTTCTACTTGTGTCAACCATTTGTTGATCTCTTGCTCTGATGTGTTGTTACTTATCATGCTTGTATTCATTATGATCCAGAAGTCAACATTAAAACCATCTCGGGGTATAATACAGGTGCAAAGATATTCATATTTGCAGACAGTTTCATCGATAGTTAATGGTGTTATTGGGTTGGTGCATTTGTGCTTAGGCGTTTGGGTTTTAGAGGAAAAGTTGAGGAAAACCCAAACTGTGTTGCCTTTTGATTGGTGGTTGCTAGAAATCTTTCACGGTTTAACGTGGTTGTTAGTGAGTTTAATGTTAAGTCTTAAGTTGAAACAACTTCCAAGAAGATGGTCGAGGCTTTATTCTATTCTAATATTCTTGATTTCTGGTATTTTCTGTGCGTCATCATTGTTTTATGCAATTAGTAGCAGAGAACTGTCCCTTATTATAGCTTCAGATATTCTATCTTTTCTGGGGGCGATGTTATTGTTATTATGCACGCATAAGGAATCCAGTTATGGAGACACTAACGGAGAAACTGATGAAAGTCTTTGTGCCCTCTTAAATGGTCAGTCTAATAAAAAAGAATCTATTGCATATGTAACACCATTTGCCAAAGCGGGATTCTTCAATAGAATGTCGTTTTGGTGGTTGAATCCATTGATGAAAATGGGTAAAGAGAAAACACTTCAGGATGAAGACATTCCAGGGTTACGGGAGGAAGATCGAGCAGAAAGTTGTTATTCTCTATTTCTGGACCAACTGAACAGAAAAATACAAAAGGATCCATCCTCGCAACCATCAGTTTTGAGGATAATACTTTTATGTCATTGGAGAGAAATTTTAGTATCAGGATTCTTTGCAATGCTTAAGGTACTTGCAGTGTCTTCGGGACCTCTTCTTTTGAATTCTTTTATATTGGTTGCTGAGGGTAATGAGAGTTTCAAATATGAAGGTCTTGTGTTGGCAATATCACTTTTTTTTACAAAATCCATTGAATCCCTTTCTCAAAGGCAATGGTATTTCCGCTGCAGACTTATTGGTCTGAAAGTTAGATCATTGCTAACTGCAGCCATTTATAGAAAGCAATTGAGGTTATCCAATTCTGCTAGACTGATGCACTCTGGTGGTGAGATGATGAATTATGTCACTGTGGATGCTTATAGAATTGGTGAATTTCCCTATTGGTTTCACCAGACTTGGACAACTAGCTTCCAGCTATGTATCTCATTAGTAATACTTTTTCGTGCTGTTGGGTTGGCAACAGTTGCCTCCTTGGTGGTGATAGTAATCACTGTTCTTTGCAATACTCCACTTGCAAAGTTACAACACAAGTTTCAAAGCAAACTTATGGTGGCACAAGATGAGAGATTGAAAGCTTATTCCGAGGCTCTTGTGAATATGAAGGTGTTGAAGTTGTATGCATGGGAAACCAATTTTAGAAATGCTATAGAGAGATTAAGGAATGAGGAGCTCAAATGGTTGTATGCAGTGCAAATAAGAAAGGCATACAACACCTTTCTCTTTTGGTCCAGCCCTGTTCTGATCTCTGCTGCTTCCTTTGGGGCATGTTACTTTCTTAATATTCCTTTGCATGCAAATAATGTTTTCACTTTTGTGGCTACTTTGCGCCTTGTTCAAGATCCAATTAGAACCATCCCTGATGTTATTGGGGTGGTCATTCAGGCAAAAGTTGCGTTTACTCGGATTGTAAAATTTCTGGAGGCACCTGAACTGCAGAGTGTAAATGTCACAAAAAGGTGTCTCGATGACAATATGAAGGGTTCAATAACAATCAAGTCTGCCGACTTTTCATGCGAAGATAATGCATCAGAGCCAACACTCAGAAACATAAATTTGGAGGTTAGACCAGGGCAAAAGGTGGCTATTTGTGGAGAGGTTGGCTCGGGCAAATCAACTCTCTTAGCAGCGATCCTCAGAGAAGTTTCTATGACTCAAGGAGAACTTGAAGTGCATGGAAAGTTTGCCTATGTTTCTCAAACAGCATGGATACAATCAGGTACAATACGTGAGAATATATTGTTTGGGGCAGACATGGATGCTGAAAAATATCAAGTAACACTTCATAGGTCTTCACTATTGAAGGACCTGGAGTTGTTTCCCTATGGCGATCTCACTGAAATAGGAGAGAGAGGAGTTAACCTAAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCACGTGCACTATATCAGAATGCTGATATATATCTCTTGGATGACCCATTCAGTGCTGTTGATGCACATACTGCAACAAATTTGTTTAATGAATACATAATGGAAGGACTTGCTGGGAAAACAGTCTTGCTCGTGACTCATCAAGTTGACTTCCTTCCAGCATTTGATTCTGTTTTGTTGATGTCAGATGGGGAAATTATAGAAGCTGCTCCGTATCACCATTTGTTGAGCTCAAGCCAAGAATTTCAGAACCTTGTGAATGCCCACAAAGAGACTGCTGGTTCTGACAGGCATGTGGATGTCACTTCTTCCCAGAAACATTCAAATAGTTCTAGAGATATTAGAAAATCATCTATGGAGAAACATTATGAAGCATCAAAAGGTGATCAATTGATTAAGCAAGAAGAGAGAGAAAAGGGAGACCATGGTTTCAAACCTTATATACAGTATCTGAATCAGAACAAAGGATATATATTCTTCTCTTTGGCTGTTTTTTCTCAAATAACGTTTGTGATTGGCCAAGTATTACAAAACTCATGGATGGCCGCTGGTGTTGACAACCCTCGAGTCAGCTCTTTGAAATTGATTGTCGTTTACTTGTTGATTGGAGTTACTTCAGCAATATTCTTGTTGATTAGAAGTCTTTCTACAGTCGCTTTGAGCCTTCAATCATCAAAGTCATTATTTTTAGAGCTACTGAACTCCCTTTTTCGTGCCCCCATGTCATTTTATGACTCCACTCCTCTAGGACGGATACTAAGTAGAGTCTCCTCAGATCTCAACATTGTGGACCTTGATGTTGCATTCGGCTTGATGTTTACTGTGGGAGCTACTTCAAATTGTTGTGCTAATCTTACAGTTTTAGCAGTTGTTACTTGGCAAGTCTTGTTTGTCTCAATCCCAATGATTTATTTTGCTATCCGCTTGCAGAATTATTACTTTGCTTCTGCGAAAGAACTGATGCGGATGAATGGCACCACAAAATCCTTTGTAGCTAACCATCTTGCTGAATCTGTTGCTGGAGCTGTGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTTTTTAAGAAAAATCTTGATCTAATTGATGTCAATGCTAGTCCTTACTTCCATAGTTTTGCAGCAAATGAGTGGTTGATTCAACGATTAGAAACAGTCAGTGCTGTTGTTCTTGCATCTGCTGCACTTTGCATGGTCGTACTTCCACCTGGAAGTTTCTCCTCTGGATTTATTGGCATGGCTCTATCTTATGGCCTTTCACTTAACATGTCCTTGGTATTTTCAATTCAAAATCAATGCAATATAGCAAACTATATAATATCAGTGGAGAGGCTAAATCAGTATATGCATTTACCAAGTGAGGCCCCAGAAGTTATAGAAGGAAATCGTCCTCCTGCGAATTGGCCGGTTGCTGGTCGAGTACAAATAAAAGAATTGCAGGCCTGA 3723 0.3943 MTVFWGVFCGESGCSEAGRMPCIYDFRLLIDPSTCVNHLLISCSDVLLLIMLVFIMIQKSTLKPSRGIIQVQRYSYLQTVSSIVNGVIGLVHLCLGVWVLEEKLRKTQTVLPFDWWLLEIFHGLTWLLVSLMLSLKLKQLPRRWSRLYSILIFLISGIFCASSLFYAISSRELSLIIASDILSFLGAMLLLLCTHKESSYGDTNGETDESLCALLNGQSNKKESIAYVTPFAKAGFFNRMSFWWLNPLMKMGKEKTLQDEDIPGLREEDRAESCYSLFLDQLNRKIQKDPSSQPSVLRIILLCHWREILVSGFFAMLKVLAVSSGPLLLNSFILVAEGNESFKYEGLVLAISLFFTKSIESLSQRQWYFRCRLIGLKVRSLLTAAIYRKQLRLSNSARLMHSGGEMMNYVTVDAYRIGEFPYWFHQTWTTSFQLCISLVILFRAVGLATVASLVVIVITVLCNTPLAKLQHKFQSKLMVAQDERLKAYSEALVNMKVLKLYAWETNFRNAIERLRNEELKWLYAVQIRKAYNTFLFWSSPVLISAASFGACYFLNIPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFTRIVKFLEAPELQSVNVTKRCLDDNMKGSITIKSADFSCEDNASEPTLRNINLEVRPGQKVAICGEVGSGKSTLLAAILREVSMTQGELEVHGKFAYVSQTAWIQSGTIRENILFGADMDAEKYQVTLHRSSLLKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMSDGEIIEAAPYHHLLSSSQEFQNLVNAHKETAGSDRHVDVTSSQKHSNSSRDIRKSSMEKHYEASKGDQLIKQEEREKGDHGFKPYIQYLNQNKGYIFFSLAVFSQITFVIGQVLQNSWMAAGVDNPRVSSLKLIVVYLLIGVTSAIFLLIRSLSTVALSLQSSKSLFLELLNSLFRAPMSFYDSTPLGRILSRVSSDLNIVDLDVAFGLMFTVGATSNCCANLTVLAVVTWQVLFVSIPMIYFAIRLQNYYFASAKELMRMNGTTKSFVANHLAESVAGAVTIRAFEEEDRFFKKNLDLIDVNASPYFHSFAANEWLIQRLETVSAVVLASAALCMVVLPPGSFSSGFIGMALSYGLSLNMSLVFSIQNQCNIANYIISVERLNQYMHLPSEAPEVIEGNRPPANWPVAGRVQIKELQA* 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01188 1240 SMART AAA_5 651 824 IPR003593 GO:0016887
Phac7g01188 1240 FunFam ABC transporter C family member 10 292 605 - -
Phac7g01188 1240 FunFam ABC transporter C family member 10 607 860 - -
Phac7g01188 1240 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 847 IPR003439 GO:0005524
Phac7g01188 1240 CDD ABC_6TM_ABCC_D2 915 1208 IPR044726 GO:0140359
Phac7g01188 1240 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Phac7g01188 1240 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 917 1196 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac7g01188 1240 Gene3D ABC transporter type 1, transmembrane domain 881 1214 IPR036640 GO:0005524|GO:0016020
Phac7g01188 1240 Gene3D ABC transporter type 1, transmembrane domain 300 598 IPR036640 GO:0005524|GO:0016020
Phac7g01188 1240 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac7g01188 1240 MobiDBLite consensus disorder prediction 852 893 - -
Phac7g01188 1240 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524|GO:0016887
Phac7g01188 1240 CDD ABCC_MRP_domain1 624 824 - -
Phac7g01188 1240 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 231 1239 - -
Phac7g01188 1240 FunFam ABC transporter C family member 5 882 1214 - -
Phac7g01188 1240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 619 847 IPR027417 -
Phac7g01188 1240 SUPERFAMILY ABC transporter transmembrane region 297 602 IPR036640 GO:0005524|GO:0016020
Phac7g01188 1240 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Phac7g01188 1240 Pfam ABC transporter transmembrane region 309 573 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac7g01188 1240 Pfam ABC transporter transmembrane region 917 1158 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac7g01188 1240 Gene3D - 599 873 IPR027417 -
Phac7g01188 1240 SUPERFAMILY ABC transporter transmembrane region 917 1213 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01188 Phac-Chr7 7622110 7630096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01188 618 839 Calmodulin-binding Proteins AT2G36910 31.667 2.13e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01188 K05666 - gmx:100811468 2120.12