Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01162 ATGGAACAGAAACATGTGCTGTTGTCAGCATTGAGTGTTGGGGTTGGATTGGGTGTAGGACTTGGATTGAGCACAGGACAAGCTGTTCAAAAATGGATGGGGGGAAGTTGTGAGTCTGATGAGATTTCTGGGGAGCAAATTGTGCTGGAGCTCAACAACAAAGTCATTGATGGGAAGAACAGCAAAACCACATTTAATGACTTTCCTTATTACTTAAGTGAAAGAGTCCGATTTTCGTTAACAAGTGCTGGATATGTTTATTTAAAACAAGACTTTTCCAAGCACATGAGGAACCTTTGTCCAGCAAGCAGAGCTATTTTGCTTTCGGGACCTGCAGAACTTTATCAGCAAAAGCTTGCCCAAGCTTTAGCTCATTACTTTGGATCGAAGTTACTGTTGCTAGACATTGTTGACTTCTCATTGGAGATGCAGAGGAAATATGGATTTCTCAGAAAAGAACCATATTTTAAAAGGTCAATTTCTGATGTTACTTTGGAGCGAGTGTCGGGTTTGTTTGGGTCCTTTCCGATCCTTCCTTCAACTTGCAGAACCAGAGGTACACTACTCCGACAGAGTAGTGAAATTGAAAATTCCAGAAATCCTCTGAAACTTTGTAGAAATGCCTCTGCTGGATGTGATACGATTAGCTCTTCTGAATGTGATCAGTCAGATCCAGCTCCTTTGAAGTGCTCAAGCGGCTTCTGTTTCGATGAAAAGGTCTTCGTAGAATCACTTTATAAGGTCTTGGTTTCTATCTCAGAAACCAGTTCCATTATTTTATACATCAAGGATGTTGAGAAGCTCTTTGTTCGATCACCAAGGCTACAGAATTTGTTCCAAAAGTTAATAAAGAAACTTTCAGGACCAGTATTAATACTCGGTTCGCAGATATCTGATTCTGACAAGCTCACTATGTTATTCCCTTACAACATTGAGATCAAACCACCTGAAAATGACAGCCATCTTGCAAGCTGGAAAACCAAACTGAAAGAGGACATGAAAACAATTCTGTTTCAAGATAGCAGAAACCACATTGCTGAAGTACTTGCAGCAAGTGACATTGATTGTGATGACTTGAATTCAGTCTGCCATGCTGACACTATGCTACTCAGTAATTCTATTGAAGAGATTGTGGCATCTGCAGTTTCTCACCACCTTACGGAAACTAAAGATCCAGAATATCGAAATGGAAAACTAGTTATATCAGCCAAGAGTTTGTCCCATGTATTGAGTTCGTTCCAGGAAAGTGAAAGTAATTCGGAGATTAACGATTCAAACAAGGATGTTCCTCCTGACAACGAGTATGAGAAGCGCATGAGAGCAGATGTTGTGCCTGCAAAAGAGATAGGAGTTAGATTTGAAGATATTGGTGCATTGGATGATATTAAAGAAATACTTCAAGATGAGGTCCTACTTCCCCTCAGAAGACCAGATTTATTCAATGGTGGGCTTTTGAAGCCTTATAAAGGTATATTGCTTTTTGGGCCTCCTGGTACAGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGAAGCAAGTTTCATCAATGTCTCAATCTCGACCATCACTTCAAAATGGTTTGGAGAAGATGAAAAGAATGTCCGAGCTCTGTTTTCACTAGCAGCTAAGGTTGCTCCAACTATTATTTTTATTGATGAGGTTGATAGCATGCTTGGGCAACGGACTAAATGTGGAGAGCATGAGGCAATAAGGAAGATTAAAAATGAATTCATGGTCCACTGGGATGGGCTATTGTCAAAGCCTAGTAACCGAATTCTGGTTCTTGCTGCAACTAACAGACCATATGACCTTGATGAGGCAATTATAAGACGGTTTGAGCGCAGGATCATGGTTGGCATTCCATCTGCTGAGAACAGGGAAATGATCTTGAAAACTCTCCTAGCTAAGGAAAAATATGAAAATGTTGACTTTAAAGAGCTTTCAATCATGACAAAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCACGGCTGCTGCTTATAGACCTGTTAGAGAACTACTACGACAGGAGAGGAATAAGGAAAAGAAAACGGAGGCAGAAGTTCAAAGCTCAGAAAATGCTTCTGATGCTAAAGAAGATAAAGAACACCCAGTCATTGCTTTGAGACCTTTAAACATGGATGACTTGAGACAGGCAAAGAGTCAGGTGACTGCTAGTTTTGCAGCAGAAGGATCAATAATGAGTGAGCTTGAGGAGTGGAATGATTTATTTGGAGAAGGAGGTTCAAGGAAGAAGAAGCAGGAGCAGCTTACCTATTTCCTTTAG 2295 0.4035 MEQKHVLLSALSVGVGLGVGLGLSTGQAVQKWMGGSCESDEISGEQIVLELNNKVIDGKNSKTTFNDFPYYLSERVRFSLTSAGYVYLKQDFSKHMRNLCPASRAILLSGPAELYQQKLAQALAHYFGSKLLLLDIVDFSLEMQRKYGFLRKEPYFKRSISDVTLERVSGLFGSFPILPSTCRTRGTLLRQSSEIENSRNPLKLCRNASAGCDTISSSECDQSDPAPLKCSSGFCFDEKVFVESLYKVLVSISETSSIILYIKDVEKLFVRSPRLQNLFQKLIKKLSGPVLILGSQISDSDKLTMLFPYNIEIKPPENDSHLASWKTKLKEDMKTILFQDSRNHIAEVLAASDIDCDDLNSVCHADTMLLSNSIEEIVASAVSHHLTETKDPEYRNGKLVISAKSLSHVLSSFQESESNSEINDSNKDVPPDNEYEKRMRADVVPAKEIGVRFEDIGALDDIKEILQDEVLLPLRRPDLFNGGLLKPYKGILLFGPPGTGKTMLAKAIANEAEASFINVSISTITSKWFGEDEKNVRALFSLAAKVAPTIIFIDEVDSMLGQRTKCGEHEAIRKIKNEFMVHWDGLLSKPSNRILVLAATNRPYDLDEAIIRRFERRIMVGIPSAENREMILKTLLAKEKYENVDFKELSIMTKGYTGSDLKNLCTAAAYRPVRELLRQERNKEKKTEAEVQSSENASDAKEDKEHPVIALRPLNMDDLRQAKSQVTASFAAEGSIMSELEEWNDLFGEGGSRKKKQEQLTYFL* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01162 764 ProSitePatterns AAA-protein family signature. 594 613 IPR003960 GO:0005524|GO:0016887
Phac7g01162 764 Gene3D - 623 726 - -
Phac7g01162 764 MobiDBLite consensus disorder prediction 680 707 - -
Phac7g01162 764 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 50 763 - -
Phac7g01162 764 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 450 624 - -
Phac7g01162 764 Pfam AAA+ lid domain 643 679 IPR041569 -
Phac7g01162 764 Gene3D - 451 733 IPR027417 -
Phac7g01162 764 SMART AAA_5 487 624 IPR003593 GO:0016887
Phac7g01162 764 Coils Coil 677 697 - -
Phac7g01162 764 Pfam ATPase family associated with various cellular activities (AAA) 491 620 IPR003959 GO:0005524|GO:0016887
Phac7g01162 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 450 672 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01162 Phac-Chr7 7319299 7327992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01162 451 695 Calmodulin-binding Proteins AT3G56690 38.554 2.53e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01162 - - gmx:121172906 1172.15