Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01142 ATGGTATCTAAAACCTCCAACCCCTCCCCCTCGGAGGCCTTTTACATGGACCCTTCTGCTATGCCGCTCCTCCCTTTTGCGACGGCTGTCACCGCCGCCGATGCCCTTGAGAACCCTGCTAAGAAGACTCGCAAACCTTACACTATCACCAAGTCTAGGGAGAGTTGGACCGAACCGGAGCATGACAAGTTCCTAGAAGCTCTGCAGCTATTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGTTATCCAGATACGTAGCCATGCTCAGAAATACTTTCTAAAAGTTCAGAAGAATGGGACAAGTGAACATCTTCCTCCACCCAGACCAAAAAGAAAAGCTGCTCATCCATATCCTCATAAAGCTTCAAAAAATGTTCCAGTGCTCTCACAAGTGTCTTCATCGGCTTTGCTTGAACCAGGATACATAATAAAGCATGATTCTTCAGCAATGCTTAAAACTCCTATTATTAACACTGCCTGGTCAAACAACTCTCGGCAGAAAACCGCCAATTTATTGCATGGGCACAAAGTGAATAATTGTTGCAGTAACAGTGAAAGTTCAAGAGCACAGTTGGTTGGTGAATCTAATGGTCAAGGGAATAATATCCATCCATTGAGAGTTCTTCCAGATTTTTCTGAAGTTTACGGCTTCATTGGCAGTGTATTTGATCCAAATGTAACTGGACATCTACAGAAACTAAAACAAATGGACCCTATAGATGTTGAGACGGTGCTATTGTTGATGAGAAACCTCTCTATCAATTTAGCAAGCCCAGAGTTTGAGGACCATGTAAGCATTCGTGGCAACTATCTTTGA 834 0.4329 MVSKTSNPSPSEAFYMDPSAMPLLPFATAVTAADALENPAKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHLPPPRPKRKAAHPYPHKASKNVPVLSQVSSSALLEPGYIIKHDSSAMLKTPIINTAWSNNSRQKTANLLHGHKVNNCCSNSESSRAQLVGESNGQGNNIHPLRVLPDFSEVYGFIGSVFDPNVTGHLQKLKQMDPIDVETVLLLMRNLSINLASPEFEDHVSIRGNYL* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01142 277 Pfam Myb-like DNA-binding domain 53 98 IPR001005 -
Phac7g01142 277 Gene3D - 56 103 - -
Phac7g01142 277 CDD SANT 55 98 IPR001005 -
Phac7g01142 277 FunFam protein REVEILLE 6 isoform X1 55 103 - -
Phac7g01142 277 ProSiteProfiles SANT domain profile. 51 104 IPR017884 -
Phac7g01142 277 SMART sant 52 100 IPR001005 -
Phac7g01142 277 MobiDBLite consensus disorder prediction 103 127 - -
Phac7g01142 277 NCBIfam myb-like DNA-binding domain, SHAQKYF class 51 100 IPR006447 GO:0003677
Phac7g01142 277 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Phac7g01142 277 ProSiteProfiles Myb-like domain profile. 48 98 IPR001005 -
Phac7g01142 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 102 IPR017930 -
Phac7g01142 277 PANTHER SWI/SNF COMPLEX-RELATED 28 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01142 Phac-Chr7 7154799 7159369 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac7g01142 Myb_DNA-binding 3.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01142 - - gmx:778166 445.662