LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac7g01135	ATGATATGTAAGATTTTTGTTTGCGGTACGAGGTCACAGCTATGTTCCACTGCAGTTCTGTTCATCACACTTCCCTTTTGCATCCTTCAACTAGAAACTACTCATGGCATGAGTTTTCCTCACCCTGACACTCTTCAAGGAATCCAAAGGCCAAAATCAAACCCCCCTTCAATGAACACCGTATTCCTCATACCCTTTATCCTTCTCCTTCTCACACCCTTCTCAGTTTCATTCTCTCCCACGGATAACTTCCTTCTCAGTTGTGGATCCCACAACAATGCTTCCCTCTTCAGCAGAATCTTCACGGGCGATTCCACCAATCCAGGTTCCAATTTTCTTTCTTCAGATGATTCTGTTTCACTCGCATATCAAAAGCCACCTCCGAATTTGCCCACTTTGTACCACACAGCAAGAGTTTTCAGCAGCACTGGGGGCTACAGGTTCAACATGAAGAAAAACGGCACCCACTTTGTGCGTTTTCATTTCTCCCCCTTCGAGGCTCAAAGTTTTGATCTAAAATCAGCCAAATTTAGTGTCTTTGTTAATGGGGTTTCGGTGCTGAGCAATTTCCAGCCACCTAATGATATGCTTCTCAAAGAGTTTATTCTAAACATAGAGTCAAACTTTCTTGAGATTTTGTTTAGGCCTGTTGGTGACTCGGGTTTTGCCTTTGTCAATGCTTTGGAGGTGTTTACTGCCCCTATGGATTTTGTTATAGATTTTGGAGCCAGGTTGGCTGGTCCTTCTGGGTTGGAAGAGTACAGAAACCTTTCCTCTCAGGTTTTGGAAACTGTTCATAGGATCAATGTCGGGGGTTTGAAAATAACTCCTTTCAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGATTATTTGGTGTTTAAGGGTGAAGCAAAGCCTGCAGTGAGCACCCACATACCAAATTACCAGAAGGGAGGTGCAACTAGAGAGATTGCACCTGAAAATGTTTACATGACTGCTCAGCAGATGAATAGGGAAAACTCAAGTTTGGCATCTAGGTTCAACATAACCTGGAACTTCCCTGTGTCTTCTGGTGGTGTTCCACACTTGGTTCGGTTGCATTTCTGTGATATTGTCAGTCCTGCTCTCAACTTGCTCTACTTTGATGTGTACATCAATGGCTACATTGCATACAAGGATCTTGATTTGTCAGCGCTTGCCATTAACAGGCTTGCATCACCTGTCTATGTGGATTTTGTTACAAATTCAGATGTCTCTGGTTTTGTTCAAGTGAGTGTTGGTCCTTCTGAGCTAAGCAGTTCCATAAGGAGGAATGCTATATTGAATGGTGCAGAGATAATGGAGATGGTCAATCATGTCAGTACTAATGTTGTGCATAGGAGGAAGAATTTGTGGGTGTTGGCGGGTTCAGTTGTTGGAGGAATTGTCGTCTTATTTTTAGTTGTAGCTGCTTTTCTGCTTGGTACCAAATGCAGGAACAAAAAACCAAAACAAAGAACATTGGAAAGTGTTGGATGGACACCTTTAAGCATGTTTGGAGGGAGTTCCCTTAGTAGAAGCTCTGAGCCTGGTTCTCATGGACTTCTTGGCTTGAAGATCCCTTTTGCTGAAATACAATCAGCAACAAACAACTTCAATAGAAATTTGATTATAGGGTCTGGTGGGTTTGGTATGGTATACAAGGGAGTGTTCAGAGACAATATGAAGGTTGCTGTCAAGAGGGGCATGCCAGGGTCCAGACAAGGCCTTCCCGAGTTCCAAACTGAGATAACAGTTTTGTCCAAAATTCGTCATCGCCACCTTGTTTCACTAGTTGGTTTCTGTGAAGAAAATTCAGAAATGATACTGGTCTATGAGTATGTTGAAAAGGGTCCGCTGAAGAAGCATTTGTATGGCTCATCACGACAACCACCTCTCTCTTGGAAGCAGCGTCTTGAAGTATGTATTGGTGCGGCCAGAGGTCTTCACTATCTTCACACTGGCTTTGCTCAAGGAATCATCCACCGTGACATTAAATCAACCAACATATTACTTGATGAAGACTATGTGGCCAAAGTTGCTGACTTTGGTCTTTCAAGGTCAGGACCATGCATCAATGAAACACATGTGAGTACTAATGTGAAAGGTAGTTTTGGTTATCTTGATCCCGAGTATTACCGGAGACAGCAGCTTACGGATAAGTCAGATGTTTATTCATTTGGTGTCGTGCTTTTTGAGGTTCTTTGTGGCAGACCTGCTGTTGATCCACAATTAGCAAGAGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGGCTGAAGAAAGGCATGGTGGACAAAATTGTTGACCCCCATCTTGTTGGACAGATCCAACAAGACTCCTTAAACAAATTTTGTGAAACTGCAGAGAAATGTTTGTCTGAGTATGGAGTTGACAGACCAGCTATGGGTGATGTCTTATGGAATTTGGAGTATGCACTTCAGCTCCAAGAAAGTGGACAACAAAGGGAACCACATGCCAACAGCAGTGCTAGTGAAACTGCGAGTGTGACCACTAGTACAGTTATTCCTGGAAATCCTTCTACCAACACAAGAGCAGAGAGGGATTATGATAATTTTTCTTCAGATGTTAGTACTAGCCAAGTGTTTTCCCAGCTAATGAACAATGAAGGTAGATAG	2643	0.4294	MICKIFVCGTRSQLCSTAVLFITLPFCILQLETTHGMSFPHPDTLQGIQRPKSNPPSMNTVFLIPFILLLLTPFSVSFSPTDNFLLSCGSHNNASLFSRIFTGDSTNPGSNFLSSDDSVSLAYQKPPPNLPTLYHTARVFSSTGGYRFNMKKNGTHFVRFHFSPFEAQSFDLKSAKFSVFVNGVSVLSNFQPPNDMLLKEFILNIESNFLEILFRPVGDSGFAFVNALEVFTAPMDFVIDFGARLAGPSGLEEYRNLSSQVLETVHRINVGGLKITPFNDTLWRTWIPDEDYLVFKGEAKPAVSTHIPNYQKGGATREIAPENVYMTAQQMNRENSSLASRFNITWNFPVSSGGVPHLVRLHFCDIVSPALNLLYFDVYINGYIAYKDLDLSALAINRLASPVYVDFVTNSDVSGFVQVSVGPSELSSSIRRNAILNGAEIMEMVNHVSTNVVHRRKNLWVLAGSVVGGIVVLFLVVAAFLLGTKCRNKKPKQRTLESVGWTPLSMFGGSSLSRSSEPGSHGLLGLKIPFAEIQSATNNFNRNLIIGSGGFGMVYKGVFRDNMKVAVKRGMPGSRQGLPEFQTEITVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSSRQPPLSWKQRLEVCIGAARGLHYLHTGFAQGIIHRDIKSTNILLDEDYVAKVADFGLSRSGPCINETHVSTNVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLAREQVNLAEWALEWLKKGMVDKIVDPHLVGQIQQDSLNKFCETAEKCLSEYGVDRPAMGDVLWNLEYALQLQESGQQREPHANSSASETASVTTSTVIPGNPSTNTRAERDYDNFSSDVSTSQVFSQLMNNEGR*	881

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac7g01135	880	MobiDBLite	consensus disorder prediction	820	880	-	-
	Phac7g01135	880	FunFam	Receptor-like protein kinase FERONIA	616	832	-	-
	Phac7g01135	880	Pfam	Protein tyrosine and serine/threonine kinase	545	739	IPR001245	GO:0004672\|GO:0006468
	Phac7g01135	880	FunFam	Putative receptor-like protein kinase	83	234	-	-
	Phac7g01135	880	CDD	STKc_IRAK	546	812	-	-
	Phac7g01135	880	Gene3D	Phosphorylase Kinase; domain 1	513	615	-	-
	Phac7g01135	880	FunFam	receptor-like protein kinase FERONIA	509	615	-	-
	Phac7g01135	880	ProSiteProfiles	Protein kinase domain profile.	540	814	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g01135	880	SMART	serkin_6	540	814	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g01135	880	SUPERFAMILY	Protein kinase-like (PK-like)	528	812	IPR011009	-
	Phac7g01135	880	PANTHER	OS07G0166700 PROTEIN	527	818	IPR045272	GO:0004714\|GO:0006468
	Phac7g01135	880	FunFam	Receptor-like protein kinase FERONIA	261	446	-	-
	Phac7g01135	880	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	661	673	IPR008271	GO:0004672\|GO:0006468
	Phac7g01135	880	Gene3D	-	83	235	-	-
	Phac7g01135	880	Gene3D	-	261	445	-	-
	Phac7g01135	880	ProSitePatterns	Protein kinases ATP-binding region signature.	546	568	IPR017441	GO:0005524
	Phac7g01135	880	Pfam	Malectin-like domain	86	443	IPR024788	-
	Phac7g01135	880	Gene3D	Transferase(Phosphotransferase) domain 1	616	839	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac7g01135	Phac-Chr7	7125642	7129302	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac7g01135	60	880	Receptor kinase-like Gene Family	AT3G46290	47.986	0.0	727

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Phac7g01135		Malectin_like	3.7e-31	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac7g01135	-		-	gmx:100801169	1459.12