Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01102 ATGACACAAGTTGAAGGGGTACGGGCCTGTAAATTGTTGATTGAGATGGATGATATTGAGAAAGGGATCACAAAAGCTATTGCTCAACACAGTATTAGATGGCTTGTAGTGGGAGCAGCAGCAGATGAATATAACATGGGCAAACTGGCAAAGCAAGATTCAGAGAAGGATAATTTAATACGTGAACAAGCATTGCTATCCTGTAATATTTGGTTCATTTGCAAGGGCAACCTCATATGTACTAGGGTATATAGTAAGCATACTTCTGACATTGAGAATGGACCTGCATTGTTGGTGCTCAATTCAAATACAGAAAAGACTAAATCGGAATTGAATCCTGATGCATTGAAATATTTAGATTCTGATGATATGAAAGAAATCCAAAGTATCAGTTCCCACCGTTCCTTAAATACCAAATGGTCCTTTAATAAGGTCATGGACAGGTCAAAGTTGGCAGATTTGATGTTTCATGAGGATGAAGCATTCGAAAGCCGGTGTGCTACGGAAATAAGAAGAAGAAAAGAAGTTGAAGAACAATTGGCAAGGTCAAAGCAAGAAGTACAGAAAATGAAGAATCAGCAGGATGAAATATGTGAAGAATTGCAAATGGTCAAAGACCAAAGTGCTGCACTTATGAAGCAAATTTCTGAGTCCCAGTGTACGGCAACAGAGTTTGAGGAGAAGATCATATCAGCTGTGGACCTCTTGATAAGTTTCAGGGAAAAGAGAGATAGGCTTAGAATAGAGCATGCAAATGCAGTTAGGGAAGTCCAAGTGCTTAGAAAATTTGGTGAAGCAGATACTTCCTTCTCTTATCAGGTAGAATTCCCTGCATTTTCTTTCTTGGAGATCAATGAGGCAACTCATGATTTTGATCCGTCTTGGAAGATTGGAGAGGGAAGGTATGGAAGTGTTTACAAGGGACTGCTTCGCAACATGCATGTTGCCATAAAAATGTTACCCTCTTATGGTCGTGAGAGTCTATCAGAGTTCCAACATCAGGTAGAGGTCTTGAGCAGGGTAAGACATCCAAACTTGTTAACACTAATTGGAAGCTGTGCAGAGTCTAGGTCACTTGTGTATGAGTATATAAACAATGGCAGCCTTGAAAGCCACCTTGCCCGCAAAGAAAAGAATCCACTTCCATGGCAAATTCGAATATCCGTTGCTACAGATATATGCTCAGCTCTAATCTTCATTCACTCCAGCAAGCCTTGTATTATCCATGGGAATTTGAAACCTAGTAAGGTTCTCCTTGATGCTAACTTCGTTGCCAAACTGAGTGACTTGGGCATTCCTAGTTTAGTCCAGCAAAGTTTGCATTCAGCTGATGCAAGCACAGTGTGTAACAACCCAAATGAACGTTTGGCGTATGTGGATCCAGAGTATTTTGTCAGTGGCAAGTTTACACCAGAATCAGATGTATATTCATTTGGAGTCATATTGTTACAGCTTCTAACTGGAAGACCACTTTTGGGGTTAGTTAGGGATATGAAGTGTGCATTGGAAAAAGAAAACCTTAAAGCAGTCTTGGACCTTTCAGCTGGTGAATGGCCACTTTATCAAACTGAACTGCTGGCATATTTAGCATTGAGGTGTTGTGAAAAGAGTTGGTTGAACAGGCCAGACCTTGTGTCAGAAATTTGGAGTGTTCTTGAACCATTCAAAGCTACTCGCATTGACAAACCATATTTGATTTCCAAGAAGCTTCATCGTGTTCCTTCACATTTTGTCTGCCCCATTGTCCAGGAAGTAATGGAAGATCCATACATAGCTGCAGATGGCTTTACGTATGAAGCAGAGGCAATAAGAGGGTGGTTGAATAGTGGCCACGACACTTCCCCCATGACAAACCTCAAGCTTGATCACACGGATTTAGTACCTAACTATGCTCTACATAATGCAATTATGGAGTGGCAGCAACAGTAA 1929 0.4085 MTQVEGVRACKLLIEMDDIEKGITKAIAQHSIRWLVVGAAADEYNMGKLAKQDSEKDNLIREQALLSCNIWFICKGNLICTRVYSKHTSDIENGPALLVLNSNTEKTKSELNPDALKYLDSDDMKEIQSISSHRSLNTKWSFNKVMDRSKLADLMFHEDEAFESRCATEIRRRKEVEEQLARSKQEVQKMKNQQDEICEELQMVKDQSAALMKQISESQCTATEFEEKIISAVDLLISFREKRDRLRIEHANAVREVQVLRKFGEADTSFSYQVEFPAFSFLEINEATHDFDPSWKIGEGRYGSVYKGLLRNMHVAIKMLPSYGRESLSEFQHQVEVLSRVRHPNLLTLIGSCAESRSLVYEYINNGSLESHLARKEKNPLPWQIRISVATDICSALIFIHSSKPCIIHGNLKPSKVLLDANFVAKLSDLGIPSLVQQSLHSADASTVCNNPNERLAYVDPEYFVSGKFTPESDVYSFGVILLQLLTGRPLLGLVRDMKCALEKENLKAVLDLSAGEWPLYQTELLAYLALRCCEKSWLNRPDLVSEIWSVLEPFKATRIDKPYLISKKLHRVPSHFVCPIVQEVMEDPYIAADGFTYEAEAIRGWLNSGHDTSPMTNLKLDHTDLVPNYALHNAIMEWQQQ* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01102 642 Pfam Protein tyrosine and serine/threonine kinase 296 544 IPR001245 GO:0004672|GO:0006468
Phac7g01102 642 Gene3D Transferase(Phosphotransferase) domain 1 364 558 - -
Phac7g01102 642 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 572 642 IPR013083 -
Phac7g01102 642 SUPERFAMILY Protein kinase-like (PK-like) 267 552 IPR011009 -
Phac7g01102 642 SUPERFAMILY RING/U-box 570 642 - -
Phac7g01102 642 CDD RING-Ubox_WDSUB1-like 574 629 - -
Phac7g01102 642 Coils Coil 637 642 - -
Phac7g01102 642 Coils Coil 166 207 - -
Phac7g01102 642 ProSitePatterns Protein kinases ATP-binding region signature. 297 318 IPR017441 GO:0005524
Phac7g01102 642 Pfam U-box domain 573 641 IPR003613 GO:0004842|GO:0016567
Phac7g01102 642 PANTHER OS02G0152300 PROTEIN 5 638 - -
Phac7g01102 642 Gene3D Phosphorylase Kinase; domain 1 264 363 - -
Phac7g01102 642 ProSiteProfiles Protein kinase domain profile. 291 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01102 642 SMART Ubox_2 576 639 IPR003613 GO:0004842|GO:0016567
Phac7g01102 642 ProSiteProfiles U-box domain profile. 572 642 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01102 Phac-Chr7 6911214 6918583 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01102 3 642 U-box Gene Family AT2G45910 42.637 4.22e-169 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Phac7g01102 PK_Tyr_Ser-Thr 2.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01102 - - pvu:PHAVU_007G072300g 1178.31