Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01092 ATGCTTTTAAACCAGATATGTAATGAAGGCCGTCAGAATGCTTTATCAGAGATCTTGGAGATATTGACAGTGGTGTGTGAAACTCATAATTTACCTCTGGCCCAAACATGGATTCCCTGTAAGCATCGGATTGTCTTGGCCCAAGGTGGTGGTGTGAAGAAAAGTTGTTCAAGTTTTGATGGTAGCTGCATGGGGAAAGTTTGCATGTCTACAACTGACATAGCATTCTATATTATAGATGCTCATTTATGGGGTTTCCGTGAGGCCTGTCTTGAGCATCACTTGCAACAAAGTCAAGGGGTTGCTGGGAGGGCTTTTTCGTCCCAGAGCATGTGCTTCTGTTCAAACATTACTCAATTCTGCAAAACTGATTACCCCTTAGTTCATTATGCTCTCATGTTTGGATTAACAAGCTGTTTTGCAATATGTTTACGAAGCTCTCATACAGGAACTGATGATTATGTATTAGAGTTTTTTCTGCCTCCTAGGATCACAGACTTTCATGAACAAAAGGCTTTGTTGGCGTCCATATTGGCAACAATGAAACAGCATTTCCAGAGTCTTAAGGTTGCTTCTGGTGTTGAACTTGAGGATGGTTCAATTGAAATTGTTGAAGCAACAATTGAAAGAATTCACACGAGGCATGAATCTATTCCAATTGCCCCATCTTTTAGATCACCACCTAGACCTGATACTTCACCAAATATGGTGGAGGAAGTTCCACGTGATCCATCAGAACAACAACACATATTGATGTACTGTAATGGTACCAATCATGGAGCGAATCTCAGTGATAAAGCAGGTGGAAAAATTGATCATATGACTACTTTAGAGACTAAAAACTCAAAGAAACCCTTAGAGAGGAAACGTGGAAAAACTGAGAAATCAATCAGTCTTGAAGTCTTGCAACGATATTTTGCTGGGAGTCTAAAAGATGCTGCAAAGAGCCTTGGTGTTTGCCCTACCACAATGAAGCGCATCTGTAGGCAGCATGGGATATCACGTTGGCCATCTCGAAAGATCAACAAGGTTAACCGTTCCCTGTCCAAGCTCAAGCGTGTTATTGAATCTGTTCAGGGTGCTGAAGGAGCATTTGGTTTGAATTCTCTCAGCACAAGTCCACTTCCCATTGCTGTTGGGTCTCTTCCTGAACCCTCTACTCCAAACAAGTTCAGCCAGCAAGTCTCAATGGGGATTAGACCATCAGAGCCTCAGATGAAAGTGAATGAATTGAATGCCTCCAAAGAATTAGAAACAAACAGACAAGCAGGAATGGAGGATCAATTGGTAGGAGGAAGGATAAGGAATCTTGAGAGAGTTAGTAATGATAAAGGAGGTTCTATTCAAGAGGTTGGGAGAGAACCGAAAAGGACTAGAACTGGGAGTGGCTCAAGTGAGGATAGCACAAATCCTACTTCTCACAGTTCGTGGCATGACAGTCCCCCAAATGAAAGTTCACCTGTAAAAGATATATTCATTACTTCCAACCATGATCAATGTGCTGTCCTAAGGAGATCATCACCAGGGTCAACACTGCAGCCAGCCACTGATACACCAAACCACCCTACTTCTTACCCTATGCCTGAATTTGTGTCAGCAGAACTTCAAGAGCCATTTGGGGGGATGCTACTAGAGGATGCTGGTAGTTCTAAAGACTTAAGAAATTTGTGTCCTTCAGTAGCTGAGGCCATTTTGGAGGATCTGGTCCCTGAAGCTTCTGGGATTAATCCTCCAGCCTTGGATTTGTCTCCCAAGCAAAGCATGGGTACTCCTAATAAAGTAGTGACACCTTTTGCAGCTACAAAAGAAATGAAGACTGTGACTATCAAGGCAACATACAGGGAAGATATCATAAGATTCCGGGTCTCATTGGCATGTGGCATTGTGGAACTTAAAGAAGAAGTTGCCAAAAGATTGAAACTAGAGGTTGGTACATTTGATATCAAGTACCTTGATGATGATCATGAATGGGTTTTGATAGCCTGTGATGCAGACCTGCAGGAGTGCATGGATGTCTCAAGATCATCAGGAAGCAACATAATCAGGGTTTTGGTGCATGACATAACGTCCAATCTTGGAAGCTCATGTGAGAGCTCGGGGGAGTGA 2106 0.4269 MLLNQICNEGRQNALSEILEILTVVCETHNLPLAQTWIPCKHRIVLAQGGGVKKSCSSFDGSCMGKVCMSTTDIAFYIIDAHLWGFREACLEHHLQQSQGVAGRAFSSQSMCFCSNITQFCKTDYPLVHYALMFGLTSCFAICLRSSHTGTDDYVLEFFLPPRITDFHEQKALLASILATMKQHFQSLKVASGVELEDGSIEIVEATIERIHTRHESIPIAPSFRSPPRPDTSPNMVEEVPRDPSEQQHILMYCNGTNHGANLSDKAGGKIDHMTTLETKNSKKPLERKRGKTEKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFGLNSLSTSPLPIAVGSLPEPSTPNKFSQQVSMGIRPSEPQMKVNELNASKELETNRQAGMEDQLVGGRIRNLERVSNDKGGSIQEVGREPKRTRTGSGSSEDSTNPTSHSSWHDSPPNESSPVKDIFITSNHDQCAVLRRSSPGSTLQPATDTPNHPTSYPMPEFVSAELQEPFGGMLLEDAGSSKDLRNLCPSVAEAILEDLVPEASGINPPALDLSPKQSMGTPNKVVTPFAATKEMKTVTIKATYREDIIRFRVSLACGIVELKEEVAKRLKLEVGTFDIKYLDDDHEWVLIACDADLQECMDVSRSSGSNIIRVLVHDITSNLGSSCESSGE* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01092 701 PANTHER PROTEIN NLP8 8 700 IPR045012 GO:0003700
Phac7g01092 701 MobiDBLite consensus disorder prediction 462 490 - -
Phac7g01092 701 MobiDBLite consensus disorder prediction 220 240 - -
Phac7g01092 701 Pfam PB1 domain 606 687 IPR000270 GO:0005515
Phac7g01092 701 SUPERFAMILY CAD & PB1 domains 602 691 - -
Phac7g01092 701 Gene3D - 603 687 - -
Phac7g01092 701 FunFam RWP-RK domain-containing protein 603 687 - -
Phac7g01092 701 MobiDBLite consensus disorder prediction 506 525 - -
Phac7g01092 701 SMART PB1_new 606 688 IPR000270 GO:0005515
Phac7g01092 701 CDD PB1_NLP 607 687 IPR034891 -
Phac7g01092 701 ProSiteProfiles RWP-RK domain profile. 283 364 IPR003035 -
Phac7g01092 701 MobiDBLite consensus disorder prediction 417 490 - -
Phac7g01092 701 MobiDBLite consensus disorder prediction 506 528 - -
Phac7g01092 701 ProSiteProfiles PB1 domain profile. 606 688 IPR000270 GO:0005515
Phac7g01092 701 Pfam RWP-RK domain 296 344 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01092 Phac-Chr7 6886904 6891526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01092 5 701 NLP Transcription Factor Family AT4G24020 51.182 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Phac7g01092 PB1 4e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01092 - - gmx:100786118 1221.84