Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01090 ATGTCAGAATCTGAGGAAGAAAATACAGACTATGTTACAAGGTCAAAGCCTGCAGAGGAAGCTGGCTGCACCATGGACTTCGATCTGGACTTAGAAACTTCATGGCCTTTGGATCACATGGCCTTTGTCTCCAATCCCATGTCACCTTTTCTGTTCTCCTCCACCTCTGACCAGCCTTACTCTCCTCTGTGGGCTTTCTCTGATGGAGAAGACCCCAAGCTTCCAGCTTCTGCCTTCTCTGATTGCCACAAGATCTTCCCTTGTGATTCAAATTCAATAGCTGAAAAGCCAGAGGAGAATGATGACAACAAGAAGCCTTTGCCACCACTTGCGCCTTTGCCACCAGTGGAAAATGTGGGTGGATATTGTGTAATCAAGGAAAGGATGACACAAGCGCTTCGATACTTCAAAGAGTTGACTGAATTGAATGTTTTGGCTCAAATTTGGGCACCTGTGAGGAATGGTAATCGGTATGTGCTTACAACTTCAGGTCAACCATTTGTTCTTGATCCACATAGTAATGGACTCCATCAGTATCGAACGGTCTCTCTGATGTACATGTTTGATGTGGACGGGGAGAATGATGGAAGTTTGGGACTCCCTGGTCGGGTTTTTCAGCAGAAGTTACCAGAATGGACTCCCAATGTTCTGTATTATTCTAGTAAAGAGTATCCACGCCGAGATCATGCTCAACATTACAATGTTCGTGGATCTTTGGCTTTGCCCGTGTTTGAGCCGGCATTGCAGTCATGTGTTGGTGTGCTGGAGTTGATAATGACTTCACAGAAGATTAACTATGCTCCCGAGGTTGATAAAATCTGCAAAGCCCTTGAGACAGTAAATTTGAGGAGTTCGGAAATTTTGGACCATCCATACACTCAGATATGTAATGAAGGCCGTCAGAATGCTTTATCAGAGATCTTGGAGATATTGACAGTGGTGTGTGAAACTCATAATTTACCTCTGGCCCAAACATGGATTCCCTGTAAGCATCGGATTGTCTTGGCCCAAGGTGGTGGTGTGAAGAAAAGTTGTTCAAGTTTTGATGGTAGCTGCATGGGGAAAGTTTGCATGTCTACAACTGACATAGCATTCTATATTATAGATGCTCATTTATGGGGTTTCCGTGAGGCCTGTCTTGAGCATCACTTGCAACAAAGTCAAGGGGTTGCTGGGAGGGCTTTTTCGTCCCAGAGCATGTGCTTCTGTTCAAACATTACTCAATTCTGCAAAACTGATTACCCCTTAGTTCATTATGCTCTCATGTTTGGATTAACAAGCTGTTTTGCAATATGTTTACGAAGCTCTCATACAGGAACTGATGATTATGTATTAGAGTTTTTTCTGCCTCCTAGGATCACAGACTTTCATGAACAAAAGGCTTTGTTGGCGTCCATATTGGCAACAATGAAACAGCATTTCCAGAGTCTTAAGGTTGCTTCTGGTGTTGAACTTGAGGATGGTTCAATTGAAATTGTTGAAGCAACAATTGAAAGAATTCACACGAGGCATGAATCTATTCCAATTGCCCCATCTTTTAGATCACCACCTAGACCTGATACTTCACCAAATATGGTGGAGGAAGTTCCACGTGATCCATCAGAACAACAACACATATTGATGTACTGTAATGGTACCAATCATGGAGCGAATCTCAGTGATAAAGCAGGTGGAAAAATTGATCATATGACTACTTTAGAGACTAAAAACTCAAAGAAACCCTTAGAGAGGAAACGTGGAAAAACTGAGAAATCAATCAGTCTTGAAGTCTTGCAACGATATTTTGCTGGGAGTCTAAAAGATGCTGCAAAGAGCCTTGGTGTTTGCCCTACCACAATGAAGCGCATCTGTAGGCAGCATGGGATATCACGTTGGCCATCTCGAAAGATCAACAAGGTTAACCGTTCCCTGTCCAAGCTCAAGCGTGTTATTGAATCTGTTCAGGGTGCTGAAGGAGCATTTGGTTTGAATTCTCTCAGCACAAGTCCACTTCCCATTGCTGTTGGGTCTCTTCCTGAACCCTCTACTCCAAACAAGTTCAGCCAGCAAGTCTCAATGGGGATTAGACCATCAGAGCCTCAGATGAAAGTGAATGAATTGAATGCCTCCAAAGAATTAGAAACAAACAGACAAGCAGGAATGGAGGATCAATTGGTAGGAGGAAGGATAAGGAATCTTGAGAGAGTTAGTAATGATAAAGGAGGTTCTATTCAAGAGGTTGGGAGAGAACCGAAAAGGACTAGAACTGGGAGTGGCTCAAGTGAGGATAGCACAAATCCTACTTCTCACAGTTCGTGGCATGACAGTCCCCCAAATGAAAGTTCACCTGTAAAAGATATATTCATTACTTCCAACCATGATCAATGTGCTGTCCTAAGGAGATCATCACCAGGGTCAACACTGCAGCCAGCCACTGATACACCAAACCACCCTACTTCTTACCCTATGCCTGAATTTGTGTCAGCAGAACTTCAAGAGCCATTTGGGGGGATGCTACTAGAGGATGCTGGTAGTTCTAAAGACTTAAGAAATTTGTGTCCTTCAGTAGCTGAGGCCATTTTGGAGGATCTGGTCCCTGAAGCTTCTGGGATTAATCCTCCAGCCTTGGATTTGTCTCCCAAGCAAAGCATGGGTACTCCTAATAAAGTAGTGACACCTTTTGCAGCTACAAAAGAAATGAAGACTGTGACTATCAAGGCAACATACAGGGAAGATATCATAAGATTCCGGGTCTCATTGGCATGTGGCATTGTGGAACTTAAAGAAGAAGTTGCCAAAAGATTGAAACTAGAGGTTGGTACATTTGATATCAAGTACCTTGATGATGATCATGAATGGGTTTTGATAGCCTGTGATGCAGACCTGCAGGAGTGCATGGATGTCTCAAGATCATCAGGAAGCAACATAATCAGGGTTTTGGTGCATGACATAACGTCCAATCTTGGAAGCTCATGTGAGAGCTCGGGGGAGTGA 2973 0.4346 MSESEEENTDYVTRSKPAEEAGCTMDFDLDLETSWPLDHMAFVSNPMSPFLFSSTSDQPYSPLWAFSDGEDPKLPASAFSDCHKIFPCDSNSIAEKPEENDDNKKPLPPLAPLPPVENVGGYCVIKERMTQALRYFKELTELNVLAQIWAPVRNGNRYVLTTSGQPFVLDPHSNGLHQYRTVSLMYMFDVDGENDGSLGLPGRVFQQKLPEWTPNVLYYSSKEYPRRDHAQHYNVRGSLALPVFEPALQSCVGVLELIMTSQKINYAPEVDKICKALETVNLRSSEILDHPYTQICNEGRQNALSEILEILTVVCETHNLPLAQTWIPCKHRIVLAQGGGVKKSCSSFDGSCMGKVCMSTTDIAFYIIDAHLWGFREACLEHHLQQSQGVAGRAFSSQSMCFCSNITQFCKTDYPLVHYALMFGLTSCFAICLRSSHTGTDDYVLEFFLPPRITDFHEQKALLASILATMKQHFQSLKVASGVELEDGSIEIVEATIERIHTRHESIPIAPSFRSPPRPDTSPNMVEEVPRDPSEQQHILMYCNGTNHGANLSDKAGGKIDHMTTLETKNSKKPLERKRGKTEKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFGLNSLSTSPLPIAVGSLPEPSTPNKFSQQVSMGIRPSEPQMKVNELNASKELETNRQAGMEDQLVGGRIRNLERVSNDKGGSIQEVGREPKRTRTGSGSSEDSTNPTSHSSWHDSPPNESSPVKDIFITSNHDQCAVLRRSSPGSTLQPATDTPNHPTSYPMPEFVSAELQEPFGGMLLEDAGSSKDLRNLCPSVAEAILEDLVPEASGINPPALDLSPKQSMGTPNKVVTPFAATKEMKTVTIKATYREDIIRFRVSLACGIVELKEEVAKRLKLEVGTFDIKYLDDDHEWVLIACDADLQECMDVSRSSGSNIIRVLVHDITSNLGSSCESSGE* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01090 990 PANTHER PROTEIN NLP8 57 989 IPR045012 GO:0003700
Phac7g01090 990 SMART PB1_new 895 977 IPR000270 GO:0005515
Phac7g01090 990 MobiDBLite consensus disorder prediction 90 111 - -
Phac7g01090 990 MobiDBLite consensus disorder prediction 509 529 - -
Phac7g01090 990 CDD PB1_NLP 896 976 IPR034891 -
Phac7g01090 990 MobiDBLite consensus disorder prediction 706 779 - -
Phac7g01090 990 FunFam RWP-RK domain-containing protein 892 976 - -
Phac7g01090 990 MobiDBLite consensus disorder prediction 795 817 - -
Phac7g01090 990 ProSiteProfiles PB1 domain profile. 895 977 IPR000270 GO:0005515
Phac7g01090 990 MobiDBLite consensus disorder prediction 795 814 - -
Phac7g01090 990 Pfam RWP-RK domain 585 633 IPR003035 -
Phac7g01090 990 Pfam PB1 domain 895 976 IPR000270 GO:0005515
Phac7g01090 990 ProSiteProfiles RWP-RK domain profile. 572 653 IPR003035 -
Phac7g01090 990 MobiDBLite consensus disorder prediction 751 779 - -
Phac7g01090 990 MobiDBLite consensus disorder prediction 1 23 - -
Phac7g01090 990 Gene3D - 892 976 - -
Phac7g01090 990 SUPERFAMILY CAD & PB1 domains 891 980 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01090 Phac-Chr7 6886904 6891526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01090 259 990 NLP Transcription Factor Family AT4G24020 52.520 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Phac7g01090 PB1 6.4e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01090 - - gmx:100786118 1758.04