Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01043 ATGGGGTGCCAGCCATTGGAAAAGGGAAAACCAAAACATAAGAAGGGGTTATGGTCACCTGAAGAAGACAATAAGCTCAGAAACTACATCCTTAAACATGGTCATGGCTGTTGGAGTTCTGTCCCCATTAAGGCAGGCTTGCAAAGGAATGGAAAGAGTTGCAGACTAAGATGGATAAACTATCTAAGGCCAGGATTAAAGAGAGGGAAGTTCAGCAAACAGGAAGAAGAGACAATCCTGACCCTTCACCACATGCTAGGCAACAAGTGGTCACAGATATCACAGCATTTGCCAGGAAGAACAGACAATGAGATTAAAAACTACTGGCATTCATATTTGAAAAAGAAAGTGGCCAAAGCTAAGGAAATGGATTTTCATAACCAAATGAAGTATGCTAGCTCAAGCTCAGATACCATGGAGTCTTCAAATTCTCTCCAAAAACTTGCAACTCAAGGTACACAGAATTTTAACTTCACCAATGAGGCTTGTCAGAGCTCCTTACCAAAATTGTTATTTGCTGAGTGGCTTTCATTGGATCAAGTAAACTCTGCAAATTCAGTTGACTCTTTTGGTCTGAGGAATGGATTTGATCAAAATTCAACTCTTGAGGAAGCTTCAATTCATGATATGTCAGAGGTACCCTTTGGTGGAGGGTACCTTAGATGCTTGGCAAACATTTCAGCCCCTGAGATGTTCAATTCAGAGCTGAAGTATGCAAATGAGATGGCGGAAAATGGTTTCATCCATTGTGTGCCTGGAGTTGACTTGAGTAGCAATTTCAGCATGAGCAATGATGCCATAATGTGGGCTGCTATAGCATCCCAATTACCTGGAAGAACAGACAATGAGATTAAGAACTATTGGAACACCCATCTAAAGAAGCGTCTCCTTCGATCATGTCATTCCCTAAGAGAAAAACAGTCATGTCTGATTCTGGATCAAACTATTGTCAAGTCTGAATCTCCTTCTACGCGTCACATGGTACAATGGGAAAGTGTAAGAGTTGAGGCAGAGGCAAGGTTGTCAATGGAATCCTCGTTGCTCAGTTCATGGCCAACGAGCACAACATGCCCTGATCACTTTCTCCATCTTTGGAATTCTGAGGTTGGAAAGTCATTTCGCATGGTCAAGGGAAAGGAAGGAGTTGTGAGTCAAAGTCCTATCTCGCATCTGTCATCCTCATCTAAATTGGAGTCTTGTTCAGACGTGTCAGTGCAGGTGAAAAACAATGGAACTAGTAGCCTCAATCCACGCATTGAGGATGTGAAAATGGTTCATGAACAGATAAGTAGCTACAAACCAAAGCTTGATGACACAGCTGGGTCTGACTCAGGCAATTATGAATTTCTTGATACTTCAGATTCTGCACTAAAGCACCTACTACATATGTCTGATGGTGATGTTGGATTCTTGGGACAGAATGATAATTTCTTGAATCTCCTTGATGCTACATGTGACCAAGATAGTTTCTTTCATATCTCTTCTTCAGAGAAAGGCAATCTTTGA 1506 0.4163 MGCQPLEKGKPKHKKGLWSPEEDNKLRNYILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGKFSKQEEETILTLHHMLGNKWSQISQHLPGRTDNEIKNYWHSYLKKKVAKAKEMDFHNQMKYASSSSDTMESSNSLQKLATQGTQNFNFTNEACQSSLPKLLFAEWLSLDQVNSANSVDSFGLRNGFDQNSTLEEASIHDMSEVPFGGGYLRCLANISAPEMFNSELKYANEMAENGFIHCVPGVDLSSNFSMSNDAIMWAAIASQLPGRTDNEIKNYWNTHLKKRLLRSCHSLREKQSCLILDQTIVKSESPSTRHMVQWESVRVEAEARLSMESSLLSSWPTSTTCPDHFLHLWNSEVGKSFRMVKGKEGVVSQSPISHLSSSSKLESCSDVSVQVKNNGTSSLNPRIEDVKMVHEQISSYKPKLDDTAGSDSGNYEFLDTSDSALKHLLHMSDGDVGFLGQNDNFLNLLDATCDQDSFFHISSSEKGNL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01043 501 FunFam MYB transcription factor 12 68 - -
Phac7g01043 501 CDD SANT 18 62 IPR001005 -
Phac7g01043 501 FunFam MYB transcription factor 70 141 - -
Phac7g01043 501 CDD SANT 269 292 IPR001005 -
Phac7g01043 501 ProSiteProfiles Myb-like domain profile. 269 292 IPR001005 -
Phac7g01043 501 Pfam Myb-like DNA-binding domain 269 292 IPR001005 -
Phac7g01043 501 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Phac7g01043 501 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Phac7g01043 501 Gene3D - 15 67 - -
Phac7g01043 501 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Phac7g01043 501 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 269 296 IPR017930 -
Phac7g01043 501 SMART sant 67 115 IPR001005 -
Phac7g01043 501 SMART sant 14 64 IPR001005 -
Phac7g01043 501 SMART sant 222 294 IPR001005 -
Phac7g01043 501 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Phac7g01043 501 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Phac7g01043 501 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Phac7g01043 501 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Phac7g01043 501 PANTHER MYB DOMAIN PROTEIN 55 269 416 - -
Phac7g01043 501 Gene3D - 254 314 - -
Phac7g01043 501 Gene3D - 69 143 - -
Phac7g01043 501 CDD SANT 70 113 IPR001005 -
Phac7g01043 501 SUPERFAMILY Homeodomain-like 269 306 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01043 Phac-Chr7 6577519 6589743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01043 269 311 MYB Transcription Factor Family AT3G48920 50.000 3.82e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac7g01043 Myb_DNA-binding 4.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01043 K09422 - gmx:100790724 492.656