Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac7g01043 | ATGGGGTGCCAGCCATTGGAAAAGGGAAAACCAAAACATAAGAAGGGGTTATGGTCACCTGAAGAAGACAATAAGCTCAGAAACTACATCCTTAAACATGGTCATGGCTGTTGGAGTTCTGTCCCCATTAAGGCAGGCTTGCAAAGGAATGGAAAGAGTTGCAGACTAAGATGGATAAACTATCTAAGGCCAGGATTAAAGAGAGGGAAGTTCAGCAAACAGGAAGAAGAGACAATCCTGACCCTTCACCACATGCTAGGCAACAAGTGGTCACAGATATCACAGCATTTGCCAGGAAGAACAGACAATGAGATTAAAAACTACTGGCATTCATATTTGAAAAAGAAAGTGGCCAAAGCTAAGGAAATGGATTTTCATAACCAAATGAAGTATGCTAGCTCAAGCTCAGATACCATGGAGTCTTCAAATTCTCTCCAAAAACTTGCAACTCAAGGTACACAGAATTTTAACTTCACCAATGAGGCTTGTCAGAGCTCCTTACCAAAATTGTTATTTGCTGAGTGGCTTTCATTGGATCAAGTAAACTCTGCAAATTCAGTTGACTCTTTTGGTCTGAGGAATGGATTTGATCAAAATTCAACTCTTGAGGAAGCTTCAATTCATGATATGTCAGAGGTACCCTTTGGTGGAGGGTACCTTAGATGCTTGGCAAACATTTCAGCCCCTGAGATGTTCAATTCAGAGCTGAAGTATGCAAATGAGATGGCGGAAAATGGTTTCATCCATTGTGTGCCTGGAGTTGACTTGAGTAGCAATTTCAGCATGAGCAATGATGCCATAATGTGGGCTGCTATAGCATCCCAATTACCTGGAAGAACAGACAATGAGATTAAGAACTATTGGAACACCCATCTAAAGAAGCGTCTCCTTCGATCATGTCATTCCCTAAGAGAAAAACAGTCATGTCTGATTCTGGATCAAACTATTGTCAAGTCTGAATCTCCTTCTACGCGTCACATGGTACAATGGGAAAGTGTAAGAGTTGAGGCAGAGGCAAGGTTGTCAATGGAATCCTCGTTGCTCAGTTCATGGCCAACGAGCACAACATGCCCTGATCACTTTCTCCATCTTTGGAATTCTGAGGTTGGAAAGTCATTTCGCATGGTCAAGGGAAAGGAAGGAGTTGTGAGTCAAAGTCCTATCTCGCATCTGTCATCCTCATCTAAATTGGAGTCTTGTTCAGACGTGTCAGTGCAGGTGAAAAACAATGGAACTAGTAGCCTCAATCCACGCATTGAGGATGTGAAAATGGTTCATGAACAGATAAGTAGCTACAAACCAAAGCTTGATGACACAGCTGGGTCTGACTCAGGCAATTATGAATTTCTTGATACTTCAGATTCTGCACTAAAGCACCTACTACATATGTCTGATGGTGATGTTGGATTCTTGGGACAGAATGATAATTTCTTGAATCTCCTTGATGCTACATGTGACCAAGATAGTTTCTTTCATATCTCTTCTTCAGAGAAAGGCAATCTTTGA | 1506 | 0.4163 | MGCQPLEKGKPKHKKGLWSPEEDNKLRNYILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGKFSKQEEETILTLHHMLGNKWSQISQHLPGRTDNEIKNYWHSYLKKKVAKAKEMDFHNQMKYASSSSDTMESSNSLQKLATQGTQNFNFTNEACQSSLPKLLFAEWLSLDQVNSANSVDSFGLRNGFDQNSTLEEASIHDMSEVPFGGGYLRCLANISAPEMFNSELKYANEMAENGFIHCVPGVDLSSNFSMSNDAIMWAAIASQLPGRTDNEIKNYWNTHLKKRLLRSCHSLREKQSCLILDQTIVKSESPSTRHMVQWESVRVEAEARLSMESSLLSSWPTSTTCPDHFLHLWNSEVGKSFRMVKGKEGVVSQSPISHLSSSSKLESCSDVSVQVKNNGTSSLNPRIEDVKMVHEQISSYKPKLDDTAGSDSGNYEFLDTSDSALKHLLHMSDGDVGFLGQNDNFLNLLDATCDQDSFFHISSSEKGNL* | 502 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac7g01043 | 501 | FunFam | MYB transcription factor | 12 | 68 | - | - | |
Phac7g01043 | 501 | CDD | SANT | 18 | 62 | IPR001005 | - | |
Phac7g01043 | 501 | FunFam | MYB transcription factor | 70 | 141 | - | - | |
Phac7g01043 | 501 | CDD | SANT | 269 | 292 | IPR001005 | - | |
Phac7g01043 | 501 | ProSiteProfiles | Myb-like domain profile. | 269 | 292 | IPR001005 | - | |
Phac7g01043 | 501 | Pfam | Myb-like DNA-binding domain | 269 | 292 | IPR001005 | - | |
Phac7g01043 | 501 | Pfam | Myb-like DNA-binding domain | 15 | 62 | IPR001005 | - | |
Phac7g01043 | 501 | Pfam | Myb-like DNA-binding domain | 68 | 113 | IPR001005 | - | |
Phac7g01043 | 501 | Gene3D | - | 15 | 67 | - | - | |
Phac7g01043 | 501 | ProSiteProfiles | Myb-like domain profile. | 63 | 113 | IPR001005 | - | |
Phac7g01043 | 501 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 269 | 296 | IPR017930 | - | |
Phac7g01043 | 501 | SMART | sant | 67 | 115 | IPR001005 | - | |
Phac7g01043 | 501 | SMART | sant | 14 | 64 | IPR001005 | - | |
Phac7g01043 | 501 | SMART | sant | 222 | 294 | IPR001005 | - | |
Phac7g01043 | 501 | SUPERFAMILY | Homeodomain-like | 12 | 109 | IPR009057 | - | |
Phac7g01043 | 501 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 63 | 117 | IPR017930 | - | |
Phac7g01043 | 501 | ProSiteProfiles | Myb-like domain profile. | 10 | 62 | IPR001005 | - | |
Phac7g01043 | 501 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 10 | 62 | IPR017930 | - | |
Phac7g01043 | 501 | PANTHER | MYB DOMAIN PROTEIN 55 | 269 | 416 | - | - | |
Phac7g01043 | 501 | Gene3D | - | 254 | 314 | - | - | |
Phac7g01043 | 501 | Gene3D | - | 69 | 143 | - | - | |
Phac7g01043 | 501 | CDD | SANT | 70 | 113 | IPR001005 | - | |
Phac7g01043 | 501 | SUPERFAMILY | Homeodomain-like | 269 | 306 | IPR009057 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac7g01043 | Phac-Chr7 | 6577519 | 6589743 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac7g01043 | 269 | 311 | MYB Transcription Factor Family | AT3G48920 | 50.000 | 3.82e-06 | 46.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Phac7g01043 | Myb_DNA-binding | 4.8e-12 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac7g01043 | K09422 | - | gmx:100790724 | 492.656 |