Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01026 ATGGCTCCGCCGCTGGAACACAACAGCGACTCCACCAGCGCCGAGTCTCAGAGATCCATTCCGACGCCGTTTCTCACCAAAACCTACCAGCTCGTCGACGATCCCGCCATCGATGATGTCATTTCCTGGAACGATTCTGGATCATCCTTCATCGTTTGGAACACCACCGTTTTTGCCAGGGATTTGCTTCCTAAATATTTCAAGCACAACAACTTTTCCAGCTTCGTTCGCCAACTCAACACCTATGGATTCAGAAAAGTTGTACCTGATCGGTGGGAATTCTCCAACGATTGTTTCCGAAGAGGCCAGAAGCGGCTTCTCTGCGAAATTCAACGACGGAAGATCCTCTCCTCGTCGCCGCCAGCCGGAGCAACTGGTAGCGTGGCGGTTCCGTCGCTGCCGACGCCCTCCGCCATTCCGATAGCGAAGTCGATTGTGTCGCCGTCGAACTCAACGGAGGAGCAGGTGATCTCGTCGAACTCGTCGCCGTCGAGAGTGCCGGCAGAGCTTTTGGACGAGAACGAGCGGCTGAAAAAGGAGAACATTCTTTTGACGAAGGAATTGGAAGAGATGAGATCCCTCTGCAACAATATATTCAATCTCATGTCGAATTACGCAACCGCTAGAGCGGACCGTGGTGCCGAGGCGGGGAAAATGCTTGGTTTGATGCCGTCGAAGCGGTGCTCCGGTGAGGGCGCGGTGAAGGAGATGAATCCAAAGCTATTTGGAGTGGCAATCGGTACGAAGCGATCGAGAGAGGAAGGACGTGGAGCGGAATACGATACGGTTTTGAGTCTGCATCAGTTCCACGAGGACATGAAATCTGAACCGTTAGATTTCGAAAGACATGGAGAAAACAGAATTACTTCGTGGCTAAATCACTATCGCACAGCAAATGAGAGAGTGTGTAATTGA 915 0.5191 MAPPLEHNSDSTSAESQRSIPTPFLTKTYQLVDDPAIDDVISWNDSGSSFIVWNTTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFRRGQKRLLCEIQRRKILSSSPPAGATGSVAVPSLPTPSAIPIAKSIVSPSNSTEEQVISSNSSPSRVPAELLDENERLKKENILLTKELEEMRSLCNNIFNLMSNYATARADRGAEAGKMLGLMPSKRCSGEGAVKEMNPKLFGVAIGTKRSREEGRGAEYDTVLSLHQFHEDMKSEPLDFERHGENRITSWLNHYRTANERVCN* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01026 304 ProSitePatterns HSF-type DNA-binding domain signature. 63 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g01026 304 Pfam HSF-type DNA-binding 24 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g01026 304 FunFam Heat stress transcription factor B-4 16 114 - -
Phac7g01026 304 Coils Coil 174 194 - -
Phac7g01026 304 SUPERFAMILY "Winged helix" DNA-binding domain 21 113 IPR036390 -
Phac7g01026 304 Gene3D - 16 114 IPR036388 -
Phac7g01026 304 PRINTS Heat shock factor (HSF) domain signature 24 47 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g01026 304 PRINTS Heat shock factor (HSF) domain signature 75 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g01026 304 PRINTS Heat shock factor (HSF) domain signature 62 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g01026 304 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 15 247 IPR027725 -
Phac7g01026 304 SMART hsfneu3 20 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01026 Phac-Chr7 6432805 6434614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01026 2 304 HSF AT5G62020 48.936 1.01e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phac7g01026 HSF_DNA-bind 1.2e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01026 K09419 - gmx:100780987 461.455