LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac7g01019	ATGGAGGGCCCCAGTGAGATAGGTCTCATTGGGGAAAATTTTGATGCTGGCTTGATGGGGAGGATGAGGGACGATGAGTATGAAAGCCGCTCTGGAAGTGATAACTTCGATGGTGTATCTGGTGATGATCAGGATGGTGCTGATGATCAGCCACAGAGGAAGAAAAGATATCACAGACATACTCCTCACCAAATTCAAGAGCTCGAGTCTTTCTTCAAGGAGTGTCCTCATCCTGATGAGAAGCAAAGGTTGGATCTCAGTAAGAGGCTTGGCTTGGAGAATAAGCAAGTGAAATTCTGGTTTCAGAATCGACGAACCCAAATGAAGACCCAACTGGAACGCCATGAGAACATAATGCTTAGGCAGGAGAATGATAAGCTCAGAGCTGAGAACAGTCTGATGAAGGAAGCAATGTCAAATCCAGTGTGCAACAGCTGTGGTGGCCCAGCGATTCCTGGGCAGATTTCATTTGAGGAGCACCAGATTAGAATCGAGAATGCTAGACTAAAAGATGAGTTGAACCGTATATGTGCCTTAGCAAACAAGTTCCTTGGCAAGCCAATCTCATCAATGACCACTCCCATGGCTCTACCAAACTCAAATTCTGGTCTGGAACTTGGTATTGGAAGGAACGGGCTTGGTGGTTCAAGCACTCTTGGCACTCCCTTGCCAATGGGACTTGACTTGGGAGATGGAGTGTTGGGCACTCAAACTGCAATGCCCGGGATTAGACCATCATTGGGGTTGATGGGAAATGAAGTTCAGCTTGAGCGATCTATGCTTATAGATCTTGCATTGGCTGCTATGGAGGAATTGCTAAAGATGACTCAGGCAGAGAGCCCTCTTTGGATTAAGAGTTTGGATGGTGAGAAGGAAGTGTTTAATCATGAGGAGTATGCAAGGTTGTTTTCTCCTTGTATTGGCCCAAAACCCACTGGTTATGTAACTGAAGCTACAAGAGAAACTGGGATAGTAATCATCAACAGTTTAGCCCTTGTGGAAACTTTGATGGACGCGAATCGATGGGCAGAGATGTTTCCTTCTATGATTGCTAGAGCTATCAACCTGGATGTTATATCCAATGGCATGGGTGGAACACGTAATGGGGCTCTACAAGTGATGCATGCTGAGGTACAATTGCTTTCACCACTAGTCCCTGTTCGTCAAGTGAGATTCATCCGGTTCTGTAAGCAGCATGCAGAAGGTGTATGGGCTGTGGTTGATGTTTCTATTGATATTGTTCATGATTCTGCTAATGCACAGCCATTCATGAGCTGTAGGAGGCTTCCTTCTGGCTGTATTGTGCAGGATATGCCCAATGGTTACTCCAAGGTTACTTGGCTTGAGCATTGGGAGTATGATGAGAGTGTTGTTCACCAACTTTATCGCCCATTGCTTAGTTCTGGTGTTGGATTTGGTGCTCATAGATGGATCGCCACTCTCCAAAGGCAATGTGAATGCTTGGCCATCCTCATGTCCTCTTCCATTTCAAGTGATGATCACACAGCATTGAGCCAAGCTGGTCGGAGGAGCATGTTGAAATTGGCACAACGCATGACTGGTAACTTCTGTTCGGGGGTTTGTGCTTCGTCTGCTCGTAAGTGGGACATGCTTCACATAGGGACTCTTGGTGATGACATGAAAGTGATGACTAGGAAAAATGTGGACGACCCTGGTGAGCCTCCTGGGATCGTGCTTAGTGCTGCAACTTCTGTTTGGATGCCAGTGTCACGGCAAAGGGTGTTTGATTTTCTGCGTGATGAACGGCTGAGAAGTGAGTGGGACATCTTGTCCAACGGTGGACCAATGCAGGAGATGGTACATATTGCCAAAGGACAAGGACATGGAAACTGCGTTTCCCTTCTCCGTGCTAATGCTGTTAATGCGAACGATAGCAGCATGCTGATTCTGCAAGAGACATGGATGGACGCTTCGTGCTCAGTGGTGGTATATGCGCCAGTTGACGTGCAATCACTGAACGTGGTGATGAGTGGGGGAGATTCTGCATACGTTGCTCTCTTGCCTTCAGGCTTCGCCATTCTCCCGGATGGTCACTGCAACAACAACAGCAGTTGCAATGGGACAATGCAGAAGGGCGGCGGTGGCGAAGAGAGCGGGGGAAGCCTTCTGACAGTGGGGTTCCAAATTCTGGTGAACAGTCTCCCAACAGCAAAACTCACAGTGGAGTCAGTGGACACTGTGAATAACCTCATTTCATGCACCATTCAGAAGATCAAAGGCGCTCTCAGAGTTGCATAA	2259	0.475	MEGPSEIGLIGENFDAGLMGRMRDDEYESRSGSDNFDGVSGDDQDGADDQPQRKKRYHRHTPHQIQELESFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENDKLRAENSLMKEAMSNPVCNSCGGPAIPGQISFEEHQIRIENARLKDELNRICALANKFLGKPISSMTTPMALPNSNSGLELGIGRNGLGGSSTLGTPLPMGLDLGDGVLGTQTAMPGIRPSLGLMGNEVQLERSMLIDLALAAMEELLKMTQAESPLWIKSLDGEKEVFNHEEYARLFSPCIGPKPTGYVTEATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINLDVISNGMGGTRNGALQVMHAEVQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIDIVHDSANAQPFMSCRRLPSGCIVQDMPNGYSKVTWLEHWEYDESVVHQLYRPLLSSGVGFGAHRWIATLQRQCECLAILMSSSISSDDHTALSQAGRRSMLKLAQRMTGNFCSGVCASSARKWDMLHIGTLGDDMKVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRVFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQGHGNCVSLLRANAVNANDSSMLILQETWMDASCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGHCNNNSSCNGTMQKGGGGEESGGSLLTVGFQILVNSLPTAKLTVESVDTVNNLISCTIQKIKGALRVA*	753

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac7g01019	752	ProSiteProfiles	START domain profile.	254	490	IPR002913	GO:0008289
	Phac7g01019	752	ProSiteProfiles	'Homeobox' domain profile.	51	111	IPR001356	GO:0003677
	Phac7g01019	752	Coils	Coil	105	140	-	-
	Phac7g01019	752	FunFam	Homeobox-leucine zipper protein GLABRA 2	263	486	-	-
	Phac7g01019	752	Gene3D	-	41	127	-	-
	Phac7g01019	752	Pfam	Homeodomain	54	109	IPR001356	GO:0003677
	Phac7g01019	752	Pfam	START domain	264	487	IPR002913	GO:0008289
	Phac7g01019	752	SUPERFAMILY	Bet v1-like	515	746	-	-
	Phac7g01019	752	CDD	START_ArGLABRA2_like	258	486	-	-
	Phac7g01019	752	SMART	HOX_1	52	115	IPR001356	GO:0003677

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac7g01019	Phac-Chr7	6378726	6384868	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac7g01019	23	749	Homeobox Transcription Factor Family	AT3G61150	63.058	0.0	924

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HB-HD-ZIP	Phac7g01019		START	6.1e-47	CL0209

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac7g01019	K09338		-	gmx:100794400	1415.98

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