Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01019 ATGGAGGGCCCCAGTGAGATAGGTCTCATTGGGGAAAATTTTGATGCTGGCTTGATGGGGAGGATGAGGGACGATGAGTATGAAAGCCGCTCTGGAAGTGATAACTTCGATGGTGTATCTGGTGATGATCAGGATGGTGCTGATGATCAGCCACAGAGGAAGAAAAGATATCACAGACATACTCCTCACCAAATTCAAGAGCTCGAGTCTTTCTTCAAGGAGTGTCCTCATCCTGATGAGAAGCAAAGGTTGGATCTCAGTAAGAGGCTTGGCTTGGAGAATAAGCAAGTGAAATTCTGGTTTCAGAATCGACGAACCCAAATGAAGACCCAACTGGAACGCCATGAGAACATAATGCTTAGGCAGGAGAATGATAAGCTCAGAGCTGAGAACAGTCTGATGAAGGAAGCAATGTCAAATCCAGTGTGCAACAGCTGTGGTGGCCCAGCGATTCCTGGGCAGATTTCATTTGAGGAGCACCAGATTAGAATCGAGAATGCTAGACTAAAAGATGAGTTGAACCGTATATGTGCCTTAGCAAACAAGTTCCTTGGCAAGCCAATCTCATCAATGACCACTCCCATGGCTCTACCAAACTCAAATTCTGGTCTGGAACTTGGTATTGGAAGGAACGGGCTTGGTGGTTCAAGCACTCTTGGCACTCCCTTGCCAATGGGACTTGACTTGGGAGATGGAGTGTTGGGCACTCAAACTGCAATGCCCGGGATTAGACCATCATTGGGGTTGATGGGAAATGAAGTTCAGCTTGAGCGATCTATGCTTATAGATCTTGCATTGGCTGCTATGGAGGAATTGCTAAAGATGACTCAGGCAGAGAGCCCTCTTTGGATTAAGAGTTTGGATGGTGAGAAGGAAGTGTTTAATCATGAGGAGTATGCAAGGTTGTTTTCTCCTTGTATTGGCCCAAAACCCACTGGTTATGTAACTGAAGCTACAAGAGAAACTGGGATAGTAATCATCAACAGTTTAGCCCTTGTGGAAACTTTGATGGACGCGAATCGATGGGCAGAGATGTTTCCTTCTATGATTGCTAGAGCTATCAACCTGGATGTTATATCCAATGGCATGGGTGGAACACGTAATGGGGCTCTACAAGTGATGCATGCTGAGGTACAATTGCTTTCACCACTAGTCCCTGTTCGTCAAGTGAGATTCATCCGGTTCTGTAAGCAGCATGCAGAAGGTGTATGGGCTGTGGTTGATGTTTCTATTGATATTGTTCATGATTCTGCTAATGCACAGCCATTCATGAGCTGTAGGAGGCTTCCTTCTGGCTGTATTGTGCAGGATATGCCCAATGGTTACTCCAAGGTTACTTGGCTTGAGCATTGGGAGTATGATGAGAGTGTTGTTCACCAACTTTATCGCCCATTGCTTAGTTCTGGTGTTGGATTTGGTGCTCATAGATGGATCGCCACTCTCCAAAGGCAATGTGAATGCTTGGCCATCCTCATGTCCTCTTCCATTTCAAGTGATGATCACACAGCATTGAGCCAAGCTGGTCGGAGGAGCATGTTGAAATTGGCACAACGCATGACTGGTAACTTCTGTTCGGGGGTTTGTGCTTCGTCTGCTCGTAAGTGGGACATGCTTCACATAGGGACTCTTGGTGATGACATGAAAGTGATGACTAGGAAAAATGTGGACGACCCTGGTGAGCCTCCTGGGATCGTGCTTAGTGCTGCAACTTCTGTTTGGATGCCAGTGTCACGGCAAAGGGTGTTTGATTTTCTGCGTGATGAACGGCTGAGAAGTGAGTGGGACATCTTGTCCAACGGTGGACCAATGCAGGAGATGGTACATATTGCCAAAGGACAAGGACATGGAAACTGCGTTTCCCTTCTCCGTGCTAATGCTGTTAATGCGAACGATAGCAGCATGCTGATTCTGCAAGAGACATGGATGGACGCTTCGTGCTCAGTGGTGGTATATGCGCCAGTTGACGTGCAATCACTGAACGTGGTGATGAGTGGGGGAGATTCTGCATACGTTGCTCTCTTGCCTTCAGGCTTCGCCATTCTCCCGGATGGTCACTGCAACAACAACAGCAGTTGCAATGGGACAATGCAGAAGGGCGGCGGTGGCGAAGAGAGCGGGGGAAGCCTTCTGACAGTGGGGTTCCAAATTCTGGTGAACAGTCTCCCAACAGCAAAACTCACAGTGGAGTCAGTGGACACTGTGAATAACCTCATTTCATGCACCATTCAGAAGATCAAAGGCGCTCTCAGAGTTGCATAA 2259 0.475 MEGPSEIGLIGENFDAGLMGRMRDDEYESRSGSDNFDGVSGDDQDGADDQPQRKKRYHRHTPHQIQELESFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENDKLRAENSLMKEAMSNPVCNSCGGPAIPGQISFEEHQIRIENARLKDELNRICALANKFLGKPISSMTTPMALPNSNSGLELGIGRNGLGGSSTLGTPLPMGLDLGDGVLGTQTAMPGIRPSLGLMGNEVQLERSMLIDLALAAMEELLKMTQAESPLWIKSLDGEKEVFNHEEYARLFSPCIGPKPTGYVTEATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINLDVISNGMGGTRNGALQVMHAEVQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIDIVHDSANAQPFMSCRRLPSGCIVQDMPNGYSKVTWLEHWEYDESVVHQLYRPLLSSGVGFGAHRWIATLQRQCECLAILMSSSISSDDHTALSQAGRRSMLKLAQRMTGNFCSGVCASSARKWDMLHIGTLGDDMKVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRVFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQGHGNCVSLLRANAVNANDSSMLILQETWMDASCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGHCNNNSSCNGTMQKGGGGEESGGSLLTVGFQILVNSLPTAKLTVESVDTVNNLISCTIQKIKGALRVA* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01019 752 ProSiteProfiles START domain profile. 254 490 IPR002913 GO:0008289
Phac7g01019 752 ProSiteProfiles 'Homeobox' domain profile. 51 111 IPR001356 GO:0003677
Phac7g01019 752 Coils Coil 105 140 - -
Phac7g01019 752 FunFam Homeobox-leucine zipper protein GLABRA 2 263 486 - -
Phac7g01019 752 Gene3D - 41 127 - -
Phac7g01019 752 Pfam Homeodomain 54 109 IPR001356 GO:0003677
Phac7g01019 752 Pfam START domain 264 487 IPR002913 GO:0008289
Phac7g01019 752 SUPERFAMILY Bet v1-like 515 746 - -
Phac7g01019 752 CDD START_ArGLABRA2_like 258 486 - -
Phac7g01019 752 SMART HOX_1 52 115 IPR001356 GO:0003677
Phac7g01019 752 FunFam Homeobox-leucine zipper protein HDG1 40 127 - -
Phac7g01019 752 SMART START_1 263 487 IPR002913 GO:0008289
Phac7g01019 752 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 50 749 IPR042160 -
Phac7g01019 752 SUPERFAMILY Bet v1-like 256 487 - -
Phac7g01019 752 MobiDBLite consensus disorder prediction 20 61 - -
Phac7g01019 752 ProSitePatterns 'Homeobox' domain signature. 86 109 IPR017970 GO:0000981|GO:0006355
Phac7g01019 752 SUPERFAMILY Homeodomain-like 39 111 IPR009057 -
Phac7g01019 752 CDD homeodomain 53 111 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01019 Phac-Chr7 6378726 6384868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01019 23 749 Homeobox Transcription Factor Family AT3G61150 63.058 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac7g01019 START 6.1e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01019 K09338 - gmx:100794400 1415.98