Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01016 ATGGGCTTTCTCCGGCGAATTTTCGGCGCCAAAAAACCCTCAGACACCAAATCCCCCAAGAAAAGATGGGCCTTCCTCAAGCCCACCGCCCGGAACAAGTCACTCCCGCCGCCACCGCCACCGCCCCCCTCTGCCATTAACACCCACTTTGATTCATCCACTCCCTTGGACGCCAACAAGCATGCCATCGCCGTTGCCGCCGCCACCGCAGCCGTCGCCGAGGCCGCTCTTGCCGCCGCACACGCCGCAGCCGAGGTTGTCAGACTCACTAGCGGCGGCGGCGCCGCCACAAGTAACAGCACCAGCACAAGACCCGCCGCGGCGGCGGCGCGTGTTAGCCAGCTGCGGTTGCCGGAGCAGACTGCAGCCGTTACGATACAATCGGCCTTCCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCACTAAAAGCATTGGTGAAGCTTCAAGCATTGGTTAGGGGCCACATTGTGAGAAAGCAAAGTGCTGATATGCTGAGGCGCATGCAAACATTGGTGAAACTTCAGGCCCAGGCACGTGCAAGCCGTGCGCACTTGTCATATTATACGCCTTCTTTCAAGTCTTCCCTTTCTCACTACCCTGTCCCTGAAGAATATGAACACCCACCTCGTGCCCTGAATACAAAATTTGATGGATCTTCTATCCTTAAGAGATGTAGTTCCAATGCCAATTGTAGGAACGTTGACTCAGAAGGAGCCCGGTTTGATTCGAATTGGTTAAACCGTTGGATGGAATTAGATAACAAGTGCAGGCAAACGGGAGATGCTTCATTGAAAACTGGACGCCCTGATGATGATAAAAGTGACAAGATTCTCGAAGTAGATACTTGGAGGCCACACTTCAAGCCTCACCACAGTAGCAGCTCCGTTCAGACAGCACATTATTATTTGAGTTCTGACTGCAATAATGATAACTTTATGGCACATGAGTCTCCATCAAAACGTTCAGCAAAGGCTCTAAACCAAAGTTTCTCATCACGGGAGGTATTGCAGCTAAACTCTTTGAAGTTTCACAGAGGGAAAGAAGAAGCAACTTCAAGAACTGCCGACAATAGTCCACAATCATTTTCAGCCAATTCTAGAAATGGAAGTGGTGCAAAGAGGGGTCCCTTCACACCTACCAGGAGTGAGTGTTCATGGGGTTTCTTCAGTGGCTACTCGGGTCACCCCAATTACATGGCAAACACTGAATCTTTTCAAGCTAAGGTTAGATCACAAAGTGCACCCAGACAAAGGCTGGAGTTTGACAGATACGGTTCCACTAGGAGGCCTGTTCATGTGGTGGGGCCTAATTCAGACCAGGATTCAGATTTAAGAAACAAAGTCTTACCTGCTTCTAACAGTGTCAACAGAATTGGGAGTAGTAATTTAAGGTCACGTTGA 1401 0.5032 MGFLRRIFGAKKPSDTKSPKKRWAFLKPTARNKSLPPPPPPPPSAINTHFDSSTPLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGGAATSNSTSTRPAAAAARVSQLRLPEQTAAVTIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVKLQAQARASRAHLSYYTPSFKSSLSHYPVPEEYEHPPRALNTKFDGSSILKRCSSNANCRNVDSEGARFDSNWLNRWMELDNKCRQTGDASLKTGRPDDDKSDKILEVDTWRPHFKPHHSSSSVQTAHYYLSSDCNNDNFMAHESPSKRSAKALNQSFSSREVLQLNSLKFHRGKEEATSRTADNSPQSFSANSRNGSGAKRGPFTPTRSECSWGFFSGYSGHPNYMANTESFQAKVRSQSAPRQRLEFDRYGSTRRPVHVVGPNSDQDSDLRNKVLPASNSVNRIGSSNLRSR* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01016 466 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Phac7g01016 466 PANTHER IQ-DOMAIN 5-RELATED 16 438 - -
Phac7g01016 466 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Phac7g01016 466 MobiDBLite consensus disorder prediction 408 466 - -
Phac7g01016 466 SMART iq_5 141 162 IPR000048 GO:0005515
Phac7g01016 466 SMART iq_5 118 140 IPR000048 GO:0005515
Phac7g01016 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 164 IPR027417 -
Phac7g01016 466 MobiDBLite consensus disorder prediction 353 375 - -
Phac7g01016 466 MobiDBLite consensus disorder prediction 1 53 - -
Phac7g01016 466 Pfam Protein of unknown function (DUF4005) 358 422 IPR025064 -
Phac7g01016 466 MobiDBLite consensus disorder prediction 345 378 - -
Phac7g01016 466 Gene3D - 118 171 - -
Phac7g01016 466 MobiDBLite consensus disorder prediction 32 46 - -
Phac7g01016 466 MobiDBLite consensus disorder prediction 439 466 - -
Phac7g01016 466 Pfam IQ calmodulin-binding motif 143 160 IPR000048 GO:0005515
Phac7g01016 466 Pfam IQ calmodulin-binding motif 122 140 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01016 Phac-Chr7 6346057 6351000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01016 1 420 IQD Protein Family AT5G62070 45.561 1.77e-63 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01016 - - gmx:100783694 692.189